Variant report

Variant	rs199628740
Chromosome Location	chrY:20104256-20104257
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3323847	chrY:19761870-20363015	ZNF genes & repeats	TF binding region lncRNA	31 gene(s)	inside rSNPs	n/a
2	nsv469874	chrY:19958972-20208953	ZNF genes & repeats	TF binding region lncRNA	9 gene(s)	inside rSNPs	n/a
3	nsv482576	chrY:19958972-20208953	ZNF genes & repeats	TF binding region lncRNA	9 gene(s)	inside rSNPs	n/a
4	esv3443758	chrY:20029498-20340872	ZNF genes & repeats	TF binding region lncRNA	15 gene(s)	inside rSNPs	n/a
5	nsv869477	chrY:20063342-20961810	Enhancers Weak transcription Active TSS ZNF genes & repeats	TF binding region CpG island lncRNA	46 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrY:20104200-20104400	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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