Variant report

Variant rs2013162
Chromosome Location chr1:209968684-209968685
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:209957800-209978600 Weak transcription Spleen Spleen
2 chr1:209958000-209971600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr1:209958400-209971800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr1:209958400-209974000 Weak transcription Aorta Aorta
5 chr1:209958400-209978600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr1:209958600-209971200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr1:209958600-209972000 Weak transcription Fetal Kidney kidney
8 chr1:209958600-209978800 Weak transcription Right Ventricle heart
9 chr1:209960800-209969000 Strong transcription Placenta Placenta
10 chr1:209961000-209974600 Weak transcription Right Atrium heart
11 chr1:209961600-209974600 Strong transcription Placenta Amnion Placenta Amnion
12 chr1:209962000-209972600 Weak transcription iPS-20b Cell Line embryonic stem cell
13 chr1:209962200-209977800 Weak transcription Duodenum Smooth Muscle Duodenum
14 chr1:209963000-209978800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
15 chr1:209964200-209976000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr1:209964200-209977800 Weak transcription Rectal Smooth Muscle rectum
17 chr1:209964200-209978000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr1:209964400-209978200 Weak transcription H9 Cell Line embryonic stem cell
19 chr1:209964600-209971600 Weak transcription iPS-15b Cell Line embryonic stem cell
20 chr1:209965200-209975400 Weak transcription Pancreatic Islets Pancreatic Islet
21 chr1:209965600-209969600 Weak transcription Fetal Adrenal Gland Adrenal Gland
22 chr1:209965800-209970600 Strong transcription Liver Liver
23 chr1:209965800-209974600 Weak transcription Small Intestine intestine
24 chr1:209966000-209969400 Strong transcription Duodenum Mucosa Duodenum
25 chr1:209966000-209973000 Weak transcription Left Ventricle heart
26 chr1:209966000-209976200 Strong transcription Rectal Mucosa Donor 29 rectum
27 chr1:209966000-209978000 Weak transcription Colonic Mucosa Colon
28 chr1:209966000-209978400 Weak transcription HUES48 Cell Line embryonic stem cell
29 chr1:209966200-209970800 Weak transcription Stomach Mucosa stomach
30 chr1:209966200-209974600 Strong transcription Rectal Mucosa Donor 31 rectum
31 chr1:209966400-209971000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr1:209966400-209971200 Strong transcription HMEC breast
33 chr1:209967000-209968800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr1:209967000-209969600 Strong transcription Pancreas Pancrea
35 chr1:209968000-209968800 Strong transcription H1 Cell Line embryonic stem cell
36 chr1:209968000-209968800 Genic enhancers NHEK skin
37 chr1:209968000-209970000 Strong transcription HUVEC blood vessel
38 chr1:209968000-209972000 Genic enhancers Fetal Intestine Small intestine
39 chr1:209968400-209969000 Strong transcription Gastric stomach
40 chr1:209968400-209969000 Strong transcription Sigmoid Colon Sigmoid Colon
41 chr1:209968400-209969600 Strong transcription Esophagus oesophagus
42 chr1:209968400-209971200 Genic enhancers Breast Myoepithelial Primary Cells Breast
43 chr1:209968400-209971800 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr1:209968400-209975000 Weak transcription HUES6 Cell Line embryonic stem cell
45 chr1:209968600-209969000 Genic enhancers Fetal Intestine Large intestine
46 chr1:209968600-209969000 ZNF genes & repeats Lung lung
47 chr1:209968600-209974200 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin

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