Variant report

Variant rs926346
Chromosome Location chr1:209962204-209962205
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:209957800-209978600 Weak transcription Spleen Spleen
2 chr1:209958000-209971600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr1:209958200-209962600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
4 chr1:209958200-209963800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr1:209958400-209962400 Enhancers Stomach Mucosa stomach
6 chr1:209958400-209962800 Weak transcription H1 Cell Line embryonic stem cell
7 chr1:209958400-209968600 Weak transcription Lung lung
8 chr1:209958400-209971800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr1:209958400-209974000 Weak transcription Aorta Aorta
10 chr1:209958400-209978600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr1:209958600-209962400 Weak transcription iPS-15b Cell Line embryonic stem cell
12 chr1:209958600-209963600 Weak transcription HUVEC blood vessel
13 chr1:209958600-209966200 Weak transcription ES-I3 Cell Line embryonic stem cell
14 chr1:209958600-209966600 Genic enhancers Breast Myoepithelial Primary Cells Breast
15 chr1:209958600-209967000 Genic enhancers NHEK skin
16 chr1:209958600-209971200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr1:209958600-209972000 Weak transcription Fetal Kidney kidney
18 chr1:209958600-209978800 Weak transcription Right Ventricle heart
19 chr1:209959400-209965000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr1:209959600-209966000 Genic enhancers Fetal Intestine Small intestine
21 chr1:209960400-209962600 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr1:209960400-209963400 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr1:209960800-209962400 Weak transcription Left Ventricle heart
24 chr1:209960800-209963800 Weak transcription Colonic Mucosa Colon
25 chr1:209960800-209969000 Strong transcription Placenta Placenta
26 chr1:209961000-209974600 Weak transcription Right Atrium heart
27 chr1:209961200-209963400 Strong transcription Sigmoid Colon Sigmoid Colon
28 chr1:209961400-209962400 Genic enhancers Duodenum Mucosa Duodenum
29 chr1:209961400-209963000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
30 chr1:209961400-209966000 Strong transcription HUES48 Cell Line embryonic stem cell
31 chr1:209961400-209966000 Genic enhancers Rectal Mucosa Donor 31 rectum
32 chr1:209961600-209962600 Weak transcription HUES6 Cell Line embryonic stem cell
33 chr1:209961600-209974600 Strong transcription Placenta Amnion Placenta Amnion
34 chr1:209961800-209962600 Genic enhancers Gastric stomach
35 chr1:209961800-209964400 Strong transcription H9 Cell Line embryonic stem cell
36 chr1:209962000-209962400 Transcr. at gene 5' and 3' Liver Liver
37 chr1:209962000-209962400 Enhancers Fetal Heart heart
38 chr1:209962000-209962600 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr1:209962000-209963000 Strong transcription Fetal Intestine Large intestine
40 chr1:209962000-209963600 Strong transcription Rectal Mucosa Donor 29 rectum
41 chr1:209962000-209963800 Weak transcription Rectal Smooth Muscle rectum
42 chr1:209962000-209966200 Strong transcription Pancreas Pancrea
43 chr1:209962000-209972600 Weak transcription iPS-20b Cell Line embryonic stem cell
44 chr1:209962200-209962400 Weak transcription Fetal Adrenal Gland Adrenal Gland
45 chr1:209962200-209963800 Strong transcription HMEC breast
46 chr1:209962200-209964400 Weak transcription Pancreatic Islets Pancreatic Islet
47 chr1:209962200-209965000 Strong transcription Esophagus oesophagus
48 chr1:209962200-209977800 Weak transcription Duodenum Smooth Muscle Duodenum

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