Variant report

Variant	rs2021817
Chromosome Location	chr6:21285965-21285966
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10946445	0.90[ASN][1000 genomes]
rs12055791	0.95[ASN][1000 genomes]
rs807836	0.91[CHB][hapmap]
rs807837	0.91[CHB][hapmap]
rs9348463	0.85[ASN][1000 genomes]
rs9348464	0.94[ASN][1000 genomes]
rs9350342	0.86[ASN][1000 genomes]
rs9358403	0.85[ASN][1000 genomes]
rs9358406	0.88[AFR][1000 genomes]
rs9358407	0.80[ASN][1000 genomes]
rs9368291	0.89[ASN][1000 genomes]
rs9368292	1.00[CHB][hapmap];0.91[JPT][hapmap];0.86[YRI][hapmap];0.94[ASN][1000 genomes]
rs9466017	0.95[AFR][1000 genomes];0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830600	chr6:21133128-21312355	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region miRNA target site	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:21285600-21286800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr6:21285800-21286800	Enhancers	Adipose Nuclei	Adipose

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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