Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11611295	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs11611351	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs11611903	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11613804	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11614579	0.82[CEU][hapmap]
rs11616189	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12297558	1.00[CHB][hapmap]
rs12317455	1.00[CHB][hapmap]
rs2103204	1.00[CHB][hapmap]
rs34242467	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs34264468	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs34498019	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34504443	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35090273	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35233512	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35508299	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs35791460	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35995108	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs61937986	0.80[AMR][1000 genomes]
rs61939810	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1041602	chr12:119472215-119499329	Enhancers Weak transcription Flanking Active TSS Strong transcription Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:119458800-119474800	Weak transcription	Fetal Brain Female	brain
2	chr12:119468000-119474400	Weak transcription	Brain Germinal Matrix	brain
3	chr12:119472000-119474400	Enhancers	iPS-18 Cell Line	embryonic stem cell
4	chr12:119472200-119474600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

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