Variant report

Variant	rs2049209
Chromosome Location	chr4:107424245-107424246
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs13113961	0.81[ASN][1000 genomes]
rs13148020	0.87[EUR][1000 genomes]
rs13148463	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1522207	0.94[EUR][1000 genomes]
rs17355932	0.86[JPT][hapmap]
rs2280631	0.81[ASN][1000 genomes]
rs2691803	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3108142	0.92[CEU][hapmap];0.80[JPT][hapmap];0.84[EUR][1000 genomes]
rs3108144	0.80[ASN][1000 genomes]
rs3108145	0.91[JPT][hapmap]
rs4484374	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4495119	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4956257	0.85[AMR][1000 genomes];0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6819528	0.80[ASN][1000 genomes]
rs6825451	0.82[EUR][1000 genomes]
rs7673683	0.81[ASN][1000 genomes]
rs7691063	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs940617	0.91[JPT][hapmap]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:107415200-107450200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr4:107423600-107425000	Weak transcription	Fetal Kidney	kidney

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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