Variant report
| Variant | rs2050922 |
|---|---|
| Chromosome Location | chr1:179131721-179131722 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:179112400-179133000 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 2 | chr1:179112400-179139000 | Weak transcription | K562 | blood |
| 3 | chr1:179113200-179133000 | Weak transcription | Hela-S3 | cervix |
| 4 | chr1:179116200-179133000 | Weak transcription | NHDF-Ad | bronchial |
| 5 | chr1:179116400-179133400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 6 | chr1:179117800-179133000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 7 | chr1:179117800-179186000 | Weak transcription | Fetal Stomach | stomach |
| 8 | chr1:179119000-179135200 | Weak transcription | Primary hematopoietic stem cells | blood |
| 9 | chr1:179119600-179133000 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 10 | chr1:179120200-179133800 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 11 | chr1:179121200-179136200 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 12 | chr1:179121800-179135800 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 13 | chr1:179121800-179138400 | Weak transcription | Aorta | Aorta |
| 14 | chr1:179122000-179135000 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 15 | chr1:179122000-179139000 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 16 | chr1:179122000-179189400 | Weak transcription | Primary B cells from cord blood | blood |
| 17 | chr1:179122400-179153000 | Weak transcription | Primary T cells from cord blood | blood |
| 18 | chr1:179122800-179139000 | Weak transcription | Lung | lung |
| 19 | chr1:179122800-179141600 | Weak transcription | Fetal Intestine Large | intestine |
| 20 | chr1:179123000-179133000 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 21 | chr1:179123400-179133000 | Weak transcription | A549 | lung |
| 22 | chr1:179123400-179136200 | Weak transcription | Colon Smooth Muscle | Colon |
| 23 | chr1:179124200-179139000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 24 | chr1:179126000-179133000 | Weak transcription | HepG2 | liver |
| 25 | chr1:179127400-179139200 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 26 | chr1:179128600-179133400 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 27 | chr1:179128800-179133000 | Weak transcription | HSMMtube | muscle |
| 28 | chr1:179129200-179132000 | Weak transcription | HSMM | muscle |
| 29 | chr1:179130600-179136000 | Weak transcription | GM12878-XiMat | blood |
