Variant report

Variant	rs2060210
Chromosome Location	chr5:151089702-151089703
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs1036198	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs10476774	0.80[EUR][1000 genomes]
rs11950215	0.87[MEX][hapmap]
rs11958295	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs13361312	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1432859	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs2010852	0.84[EUR][1000 genomes]
rs2011050	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs55779149	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs55866663	0.89[EUR][1000 genomes]
rs56413631	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs59045437	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs60901182	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs61468668	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs6579893	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6579894	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs67697712	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs72800261	0.84[EUR][1000 genomes]
rs7700495	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs982688	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs982689	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:151079000-151097000	Weak transcription	Right Atrium	heart
2	chr5:151080800-151097000	Weak transcription	NHLF	lung
3	chr5:151087400-151090200	Weak transcription	Brain Hippocampus Middle	brain
4	chr5:151087600-151090400	Weak transcription	Brain Cingulate Gyrus	brain
5	chr5:151088000-151096800	Weak transcription	Adipose Nuclei	Adipose
6	chr5:151088000-151097200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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