The 2.0 version of rSNPBase

Variant report

Variant rs2084488
Chromosome Location chr2:187298747-187298748
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:187279800-187300600 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr2:187282400-187299200 Weak transcription Stomach Smooth Muscle stomach
3 chr2:187287200-187300800 Weak transcription Ovary ovary
4 chr2:187288600-187301200 Weak transcription Gastric stomach
5 chr2:187289200-187300800 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr2:187290600-187304200 Weak transcription Stomach Mucosa stomach
7 chr2:187291600-187298800 Weak transcription Fetal Intestine Large intestine
8 chr2:187291800-187299200 Weak transcription Primary B cells from cord blood blood
9 chr2:187291800-187300400 Weak transcription Primary hematopoietic stem cells blood
10 chr2:187291800-187301800 Weak transcription GM12878-XiMat blood
11 chr2:187292000-187301200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr2:187292400-187299000 Weak transcription Primary T cells from cord blood blood
13 chr2:187292400-187299000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr2:187292600-187299200 Weak transcription Dnd41 blood
15 chr2:187293000-187300400 Weak transcription Primary T helper cells fromperipheralblood blood
16 chr2:187293000-187304400 Weak transcription Primary T helper naive cells fromperipheralblood blood
17 chr2:187293200-187299200 Weak transcription HepG2 liver
18 chr2:187293200-187302600 Weak transcription Rectal Smooth Muscle rectum
19 chr2:187293800-187322000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr2:187294200-187301400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr2:187294800-187299200 Weak transcription Pancreatic Islets Pancreatic Islet
22 chr2:187295400-187302600 Weak transcription Brain Anterior Caudate brain
23 chr2:187295600-187302400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr2:187296000-187299400 Weak transcription Skeletal Muscle Female skeletal muscle
25 chr2:187296000-187300000 Weak transcription Skeletal Muscle Male skeletal muscle
26 chr2:187296000-187300600 Weak transcription Fetal Adrenal Gland Adrenal Gland
27 chr2:187296200-187302600 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr2:187296400-187300200 Strong transcription Fetal Intestine Small intestine
29 chr2:187296600-187299000 Weak transcription Duodenum Mucosa Duodenum
30 chr2:187296800-187299200 Weak transcription Adipose Nuclei Adipose
31 chr2:187296800-187299200 Weak transcription Aorta Aorta
32 chr2:187296800-187300400 Weak transcription Brain Cingulate Gyrus brain
33 chr2:187297000-187299200 Weak transcription Fetal Stomach stomach
34 chr2:187297000-187299400 Weak transcription Spleen Spleen
35 chr2:187297200-187303200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
36 chr2:187297600-187305200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr2:187297800-187299800 Enhancers Liver Liver
38 chr2:187297800-187331200 Weak transcription Left Ventricle heart
39 chr2:187298000-187300400 Weak transcription Primary hematopoietic stem cells short term culture blood
40 chr2:187298000-187301800 Strong transcription Breast Myoepithelial Primary Cells Breast
41 chr2:187298200-187301200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr2:187298200-187304400 Weak transcription Pancreas Pancrea
43 chr2:187298400-187299600 Strong transcription Primary B cells from peripheral blood blood
44 chr2:187298600-187301000 Weak transcription Rectal Mucosa Donor 31 rectum

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Last update: Aug 31, 2015