Variant report

Variant	rs2126184
Chromosome Location	chr11:26398224-26398225
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:26396905..26399519-chr11:26402915..26404778,2	K562	blood:

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs10767520	0.94[AFR][1000 genomes];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11029543	0.85[ASN][1000 genomes]
rs11824236	0.92[ASN][1000 genomes]
rs12098873	0.92[ASN][1000 genomes]
rs12274334	0.83[ASN][1000 genomes]
rs12274387	0.84[ASN][1000 genomes]
rs12275964	0.86[ASN][1000 genomes]
rs12287530	0.85[ASN][1000 genomes]
rs12287626	0.83[ASN][1000 genomes]
rs12294597	0.85[ASN][1000 genomes]
rs12294604	0.86[ASN][1000 genomes]
rs1381177	0.92[ASN][1000 genomes]
rs1381181	0.90[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1381183	0.93[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1461374	0.92[ASN][1000 genomes]
rs1461376	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1461377	0.86[ASN][1000 genomes]
rs2006942	0.86[ASN][1000 genomes]
rs2085878	0.91[ASN][1000 genomes]
rs2085879	0.92[ASN][1000 genomes]
rs2085880	0.92[ASN][1000 genomes]
rs2126185	0.96[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2199376	0.92[ASN][1000 genomes]
rs4923354	0.93[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61877724	0.92[ASN][1000 genomes]
rs7128615	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs716701	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7480892	0.86[ASN][1000 genomes]
rs7925675	0.90[ASN][1000 genomes]
rs7945645	0.92[ASN][1000 genomes]
rs7946083	0.92[ASN][1000 genomes]
rs961685	0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2422406	chr11:26329870-26473641	Flanking Bivalent TSS/Enh Enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Weak transcription ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:26398000-26399200	ZNF genes & repeats	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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