Variant report

rSNPs within LD-proxies of this variant (count:26)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916983	chr13:80065879-80249702	Weak transcription Enhancers Genic enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
2	nsv900588	chr13:80216846-80421340	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:80233400-80248800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr13:80238600-80255000	Weak transcription	Psoas Muscle	Psoas
3	chr13:80242800-80250400	Weak transcription	Fetal Intestine Large	intestine
4	chr13:80243200-80250400	Weak transcription	Fetal Intestine Small	intestine
5	chr13:80246400-80249000	Weak transcription	Pancreas	Pancrea
6	chr13:80246600-80260600	Weak transcription	Fetal Lung	lung
7	chr13:80247400-80248600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr13:80247400-80248600	Enhancers	HSMMtube	muscle
9	chr13:80247400-80249000	Enhancers	Fetal Heart	heart
10	chr13:80247600-80248600	Enhancers	Skeletal Muscle Male	skeletal muscle
11	chr13:80248000-80250400	Weak transcription	Esophagus	oesophagus
12	chr13:80248000-80254800	Weak transcription	Fetal Muscle Leg	muscle
13	chr13:80248200-80249200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
14	chr13:80248200-80250800	Enhancers	NHEK	skin
15	chr13:80248200-80252000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
16	chr13:80248400-80249000	Weak transcription	Cortex derived primary cultured neurospheres	brain
17	chr13:80248400-80249200	Enhancers	Skeletal Muscle Female	skeletal muscle
18	chr13:80248400-80250600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
19	chr13:80248600-80251000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
20	chr13:80248600-80252400	Weak transcription	HSMMtube	muscle

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