Variant report

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10943681	0.83[EUR][1000 genomes]
rs10943682	0.90[EUR][1000 genomes]
rs10943688	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12526265	0.83[EUR][1000 genomes]
rs1410521	0.87[EUR][1000 genomes]
rs1410522	0.87[EUR][1000 genomes]
rs1897870	0.83[EUR][1000 genomes]
rs1927425	0.92[EUR][1000 genomes]
rs1927426	0.92[EUR][1000 genomes]
rs2181070	0.84[EUR][1000 genomes]
rs2295838	0.83[EUR][1000 genomes]
rs2295840	0.83[EUR][1000 genomes]
rs2295841	0.85[EUR][1000 genomes]
rs3799497	0.83[EUR][1000 genomes]
rs3812151	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs3828761	0.95[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs3967160	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4706827	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6923330	0.94[ASN][1000 genomes]
rs9294168	0.83[EUR][1000 genomes]
rs9341801	0.83[EUR][1000 genomes]
rs9341802	0.89[EUR][1000 genomes]
rs9341803	0.85[EUR][1000 genomes]
rs9343961	0.90[EUR][1000 genomes]
rs9343965	0.92[EUR][1000 genomes]
rs9350843	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9352790	0.85[EUR][1000 genomes]
rs9352797	0.87[EUR][1000 genomes]
rs9359406	0.85[EUR][1000 genomes]
rs9448880	0.88[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9448881	0.84[AFR][1000 genomes];0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv970144	chr6:80775545-80779779	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:80764600-80777200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr6:80764800-80784400	Weak transcription	Thymus	Thymus

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