Variant report

Variant	rs2163529
Chromosome Location	chr8:124840607-124840608
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:124838033..124841894-chr8:124842297..124845271,3	K562	blood:
2	chr8:124839004..124841894-chr8:124842297..124845271,2	K562	blood:

Extended variants
information (count: 59 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:58)

rs_ID	r²[population]
rs10089283	0.82[ASN][1000 genomes]
rs10106428	0.82[ASN][1000 genomes]
rs10505442	0.82[ASN][1000 genomes]
rs10956150	1.00[ASN][1000 genomes]
rs11987328	0.82[ASN][1000 genomes]
rs11991217	1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs11997795	0.82[ASN][1000 genomes]
rs11998231	1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs12545556	1.00[CHB][hapmap]
rs12550449	1.00[CHB][hapmap]
rs1367826	1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs1431667	1.00[ASN][1000 genomes]
rs1431668	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16898889	1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs1978681	1.00[CHB][hapmap]
rs1991696	1.00[ASN][1000 genomes]
rs1991698	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2116354	1.00[ASN][1000 genomes]
rs2116355	1.00[ASN][1000 genomes]
rs2163530	1.00[ASN][1000 genomes]
rs2272684	0.82[ASN][1000 genomes]
rs28412991	0.82[ASN][1000 genomes]
rs28589482	0.82[ASN][1000 genomes]
rs28701862	0.82[ASN][1000 genomes]
rs3889940	0.82[ASN][1000 genomes]
rs3889941	0.82[ASN][1000 genomes]
rs6470188	1.00[ASN][1000 genomes]
rs67260918	0.82[ASN][1000 genomes]
rs72713165	0.82[ASN][1000 genomes]
rs72715027	0.82[ASN][1000 genomes]
rs72715028	0.82[ASN][1000 genomes]
rs72715029	0.82[ASN][1000 genomes]
rs72715030	0.82[ASN][1000 genomes]
rs72715031	0.82[ASN][1000 genomes]
rs72715032	0.82[ASN][1000 genomes]
rs72715037	0.82[ASN][1000 genomes]
rs72715039	0.82[ASN][1000 genomes]
rs72715041	0.82[ASN][1000 genomes]
rs72715042	0.82[ASN][1000 genomes]
rs72715045	0.82[ASN][1000 genomes]
rs72715049	0.82[ASN][1000 genomes]
rs72715051	0.82[ASN][1000 genomes]
rs72715053	0.82[ASN][1000 genomes]
rs72715055	0.82[ASN][1000 genomes]
rs72715056	0.82[ASN][1000 genomes]
rs72715057	0.82[ASN][1000 genomes]
rs72715061	0.82[ASN][1000 genomes]
rs72715064	0.82[ASN][1000 genomes]
rs72715069	0.82[ASN][1000 genomes]
rs7387172	1.00[CHB][hapmap]
rs7825091	1.00[CHB][hapmap]
rs7825404	1.00[CHB][hapmap]
rs7826622	1.00[ASN][1000 genomes]
rs7826644	1.00[ASN][1000 genomes]
rs7836620	1.00[CHB][hapmap]
rs9297677	0.82[ASN][1000 genomes]
rs964059	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9792209	1.00[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831451	chr8:124710946-124885148	Flanking Active TSS Enhancers Weak transcription Strong transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:124829400-124845000	Weak transcription	NHLF	lung
2	chr8:124829800-124844000	Weak transcription	Fetal Lung	lung
3	chr8:124836400-124850000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr8:124837000-124843800	Weak transcription	Ovary	ovary
5	chr8:124838600-124844400	Weak transcription	Fetal Stomach	stomach
6	chr8:124840000-124844400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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