The 2.0 version of rSNPBase

Variant report

Variant rs3889940
Chromosome Location chr8:124833311-124833312
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:33 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:124809800-124833600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr8:124813400-124837600 Weak transcription Brain Substantia Nigra brain
3 chr8:124814800-124837400 Weak transcription Brain Hippocampus Middle brain
4 chr8:124819600-124836800 Weak transcription Fetal Heart heart
5 chr8:124820600-124837600 Weak transcription Cortex derived primary cultured neurospheres brain
6 chr8:124823000-124835400 Weak transcription A549 lung
7 chr8:124823000-124836000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr8:124823200-124838000 Weak transcription Right Ventricle heart
9 chr8:124824000-124837800 Weak transcription Brain Angular Gyrus brain
10 chr8:124824200-124835400 Weak transcription Brain Anterior Caudate brain
11 chr8:124824200-124836600 Weak transcription Brain Inferior Temporal Lobe brain
12 chr8:124824400-124833600 Weak transcription Aorta Aorta
13 chr8:124824400-124834200 Weak transcription Fetal Intestine Small intestine
14 chr8:124824400-124838000 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr8:124825200-124835600 Weak transcription Placenta Placenta
16 chr8:124825200-124836000 Weak transcription Fetal Intestine Large intestine
17 chr8:124825200-124837000 Weak transcription Fetal Muscle Trunk muscle
18 chr8:124825200-124837600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr8:124827000-124835400 Weak transcription HUVEC blood vessel
20 chr8:124828200-124836800 Weak transcription HUES6 Cell Line embryonic stem cell
21 chr8:124828600-124835600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr8:124828600-124835800 Weak transcription Fetal Adrenal Gland Adrenal Gland
23 chr8:124828600-124836400 Weak transcription Fetal Muscle Leg muscle
24 chr8:124828800-124837600 Weak transcription Left Ventricle heart
25 chr8:124829400-124845000 Weak transcription NHLF lung
26 chr8:124829800-124844000 Weak transcription Fetal Lung lung
27 chr8:124830000-124835600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr8:124830000-124835800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr8:124830600-124835600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr8:124831800-124835600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr8:124831800-124836200 Weak transcription Ovary ovary
32 chr8:124832000-124834800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr8:124832200-124835600 Weak transcription Fetal Stomach stomach

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Last update: Aug 31, 2015