The 2.0 version of rSNPBase

Variant report

Variant rs216538
Chromosome Location chr2:32290331-32290332
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:32287800-32290400 Active TSS HUES6 Cell Line embryonic stem cell
2 chr2:32287800-32290400 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
3 chr2:32288000-32290400 Active TSS Rectal Smooth Muscle rectum
4 chr2:32288000-32290400 Active TSS HMEC breast
5 chr2:32289400-32290400 Flanking Active TSS Primary T cells from cord blood blood
6 chr2:32289400-32290400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr2:32289400-32290800 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
8 chr2:32289400-32290800 Flanking Active TSS Primary T helper cells fromperipheralblood blood
9 chr2:32289600-32290400 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
10 chr2:32289600-32290400 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
11 chr2:32289600-32290400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr2:32289600-32290400 Flanking Active TSS Brain Cingulate Gyrus brain
13 chr2:32289600-32290400 Flanking Active TSS Skeletal Muscle Male skeletal muscle
14 chr2:32289600-32291000 Flanking Active TSS Dnd41 blood
15 chr2:32289600-32291200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr2:32289600-32330800 Weak transcription Spleen Spleen
17 chr2:32289800-32290400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr2:32289800-32290400 Enhancers Fetal Muscle Trunk muscle
19 chr2:32289800-32290400 Enhancers Placenta Placenta
20 chr2:32289800-32290400 Enhancers Placenta Amnion Placenta Amnion
21 chr2:32289800-32290600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
22 chr2:32289800-32291000 Enhancers Primary T helper naive cells fromperipheralblood blood
23 chr2:32289800-32291000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
24 chr2:32289800-32291000 Enhancers Fetal Adrenal Gland Adrenal Gland
25 chr2:32289800-32291200 Flanking Active TSS Fetal Brain Female brain
26 chr2:32289800-32292200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
27 chr2:32289800-32292200 Enhancers Primary T cells fromperipheralblood blood
28 chr2:32289800-32292600 Enhancers Primary T helper 17 cells PMA-I stimulated --
29 chr2:32289800-32293800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr2:32289800-32297000 Weak transcription Psoas Muscle Psoas
31 chr2:32289800-32298400 Weak transcription Small Intestine intestine
32 chr2:32289800-32304000 Weak transcription Ovary ovary
33 chr2:32289800-32313800 Weak transcription Stomach Smooth Muscle stomach
34 chr2:32289800-32314600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
35 chr2:32289800-32315800 Weak transcription Colon Smooth Muscle Colon
36 chr2:32289800-32319400 Weak transcription Aorta Aorta
37 chr2:32289800-32319400 Weak transcription Pancreas Pancrea
38 chr2:32289800-32330800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr2:32290000-32290400 Enhancers H1 Cell Line embryonic stem cell
40 chr2:32290000-32290400 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
41 chr2:32290000-32290400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr2:32290000-32290400 Flanking Active TSS Primary monocytes fromperipheralblood blood
43 chr2:32290000-32290400 Enhancers Muscle Satellite Cultured Cells --
44 chr2:32290000-32290400 Enhancers Adipose Nuclei Adipose
45 chr2:32290000-32290400 Enhancers HUVEC blood vessel
46 chr2:32290000-32290600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr2:32290000-32290600 Weak transcription HUES48 Cell Line embryonic stem cell
48 chr2:32290000-32290600 Enhancers Skeletal Muscle Female skeletal muscle
49 chr2:32290000-32290800 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr2:32290000-32290800 Flanking Active TSS Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015