Variant report

Variant	rs2165688
Chromosome Location	chr9:17368655-17368656
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 252 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:240)

rs_ID	r²[population]
rs10114324	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10115784	0.81[AFR][1000 genomes]
rs10117379	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10119233	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10119863	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10119902	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10120006	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10120013	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10120733	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10120761	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10125886	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1023778	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10465046	0.82[EUR][1000 genomes]
rs10738475	0.94[AFR][1000 genomes]
rs10738477	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10756861	0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10756862	0.84[AFR][1000 genomes];0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10756863	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10756864	0.84[AFR][1000 genomes];0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10756865	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10756879	0.87[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs10810753	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10810783	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10810784	0.83[EUR][1000 genomes]
rs10962918	0.81[AFR][1000 genomes]
rs10962922	0.85[EUR][1000 genomes]
rs10962923	0.84[EUR][1000 genomes]
rs10962924	0.84[EUR][1000 genomes]
rs10962925	0.83[EUR][1000 genomes]
rs10962926	0.85[EUR][1000 genomes]
rs10962927	0.84[EUR][1000 genomes]
rs10962928	0.85[EUR][1000 genomes]
rs10962932	0.85[EUR][1000 genomes]
rs10962933	0.84[EUR][1000 genomes]
rs10962938	0.85[EUR][1000 genomes]
rs10962939	0.82[EUR][1000 genomes]
rs10962940	0.85[EUR][1000 genomes]
rs10962941	0.85[EUR][1000 genomes]
rs10962942	0.85[EUR][1000 genomes]
rs10962960	0.80[AFR][1000 genomes];0.87[EUR][1000 genomes]
rs10962977	0.81[EUR][1000 genomes]
rs10962978	0.82[AFR][1000 genomes]
rs10962979	0.87[AFR][1000 genomes];0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10962981	0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10962983	0.83[EUR][1000 genomes]
rs10962984	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10962985	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10962986	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10962987	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10962989	0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10963010	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10963011	0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10963012	0.86[ASN][1000 genomes]
rs10963013	0.87[AFR][1000 genomes];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10963014	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10963028	0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10963081	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10963085	0.85[ASN][1000 genomes]
rs10963088	0.83[ASN][1000 genomes]
rs1113379	0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1113380	0.84[AFR][1000 genomes];0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1113381	0.83[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs1113382	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11525918	0.85[EUR][1000 genomes]
rs11531656	0.85[EUR][1000 genomes]
rs11534160	0.85[EUR][1000 genomes]
rs11543981	0.80[AFR][1000 genomes];0.87[EUR][1000 genomes]
rs11562139	0.84[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs12000610	0.85[EUR][1000 genomes]
rs12235987	0.85[EUR][1000 genomes]
rs12237892	0.85[EUR][1000 genomes]
rs12238753	0.85[EUR][1000 genomes]
rs12346397	0.86[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs13288412	0.86[EUR][1000 genomes]
rs13289731	0.85[EUR][1000 genomes]
rs1348279	0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1372700	0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1413418	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1413419	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1442518	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1442520	0.87[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1442521	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1442522	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1442525	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1442526	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1576958	0.85[EUR][1000 genomes]
rs1576959	0.85[EUR][1000 genomes]
rs1582029	0.82[EUR][1000 genomes]
rs1759452	0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1759453	0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1759457	0.87[AFR][1000 genomes];0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1759458	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1759459	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1759460	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1759461	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1759462	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1759463	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1759465	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1759615	0.84[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs1759616	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1759617	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1759619	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1759626	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1819484	0.85[EUR][1000 genomes]
rs1930639	0.83[AFR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1930643	0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1930644	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1930645	0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1930646	0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1930647	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1930648	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2010086	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2083694	0.84[ASN][1000 genomes]
rs2083695	0.99[AFR][1000 genomes];0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2095145	0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2099859	0.99[AFR][1000 genomes];0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2104914	0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2119906	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2119907	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2210551	0.95[AFR][1000 genomes];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2274916	0.86[ASN][1000 genomes]
rs2483208	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2584546	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2584548	0.83[ASN][1000 genomes]
rs2584549	0.80[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs2584551	0.81[ASN][1000 genomes]
rs2593388	0.83[ASN][1000 genomes]
rs2593389	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2593390	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2593418	0.83[ASN][1000 genomes]
rs2779774	0.83[AFR][1000 genomes];0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2779779	0.87[AFR][1000 genomes];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2780204	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2780205	0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2780207	0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2780210	0.82[ASN][1000 genomes]
rs2780211	0.83[ASN][1000 genomes]
rs2780213	0.82[ASN][1000 genomes]
rs2780214	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2990958	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3739488	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3739489	0.84[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs3808781	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3808785	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3814137	0.85[EUR][1000 genomes]
rs3814138	0.84[EUR][1000 genomes]
rs3814139	0.85[EUR][1000 genomes]
rs3891457	0.94[AFR][1000 genomes];0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4147023	0.84[EUR][1000 genomes]
rs4430173	0.85[EUR][1000 genomes]
rs4554574	0.90[AFR][1000 genomes]
rs4621917	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4961551	0.99[AFR][1000 genomes];0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4961554	0.97[AFR][1000 genomes];0.94[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4961556	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs55829722	0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs56402716	0.84[AFR][1000 genomes];0.86[EUR][1000 genomes]
rs57850734	0.87[EUR][1000 genomes]
rs582134	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs585682	0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs593552	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs599626	0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs600041	0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs600133	0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs601960	0.87[AFR][1000 genomes];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs606382	0.85[AFR][1000 genomes];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs610175	0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs613966	0.87[AFR][1000 genomes];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs614412	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs614471	0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs619357	0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs620280	0.83[AFR][1000 genomes]
rs631300	0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs632176	0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs632255	0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs632313	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs634383	0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs634446	0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs636093	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs642582	0.84[AFR][1000 genomes];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs643776	0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs646025	0.84[AFR][1000 genomes];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs647013	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6475122	0.84[EUR][1000 genomes]
rs6475124	0.85[EUR][1000 genomes]
rs6475125	0.85[EUR][1000 genomes]
rs6475126	0.88[EUR][1000 genomes]
rs6475127	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6475128	0.88[EUR][1000 genomes]
rs6475129	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6475140	0.87[AFR][1000 genomes]
rs659637	0.82[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs664447	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs672799	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs673587	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs677490	0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs679666	0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7018856	0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7020918	0.85[EUR][1000 genomes]
rs7021738	0.85[EUR][1000 genomes]
rs7023305	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7023540	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7025912	0.85[EUR][1000 genomes]
rs7027051	0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7027292	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7027539	0.97[AFR][1000 genomes];0.94[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7028582	0.92[AFR][1000 genomes]
rs7034768	0.85[EUR][1000 genomes]
rs7035276	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7035318	0.85[EUR][1000 genomes]
rs7035357	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7035386	0.82[EUR][1000 genomes]
rs7035525	0.85[EUR][1000 genomes]
rs7037019	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7037041	0.85[AFR][1000 genomes];0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7037408	0.85[EUR][1000 genomes]
rs7040098	0.85[EUR][1000 genomes]
rs7040666	0.85[EUR][1000 genomes]
rs7042700	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7043703	0.85[EUR][1000 genomes]
rs7044254	0.85[EUR][1000 genomes]
rs7044783	0.84[EUR][1000 genomes]
rs7046327	0.85[EUR][1000 genomes]
rs7046951	0.85[EUR][1000 genomes]
rs7047093	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7848118	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7862336	0.95[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs7865807	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7870427	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7874597	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7874945	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs870270	0.83[AFR][1000 genomes];0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9298777	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9298778	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9406667	0.86[EUR][1000 genomes]
rs9407792	0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9407793	0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9407794	0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9407804	0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9657595	0.84[AFR][1000 genomes];0.84[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:12 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1024799	chr9:16631890-17431827	Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
2	nsv892658	chr9:17041557-17532840	Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	11 gene(s)	inside rSNPs	diseases
3	nsv892661	chr9:17134245-17532840	Flanking Bivalent TSS/Enh Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
4	nsv613693	chr9:17147191-17710407	Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
5	nsv471287	chr9:17165698-17708814	Weak transcription Enhancers Bivalent/Poised TSS Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
6	nsv466269	chr9:17165698-17710407	Weak transcription ZNF genes & repeats Enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Active TSS Flanking Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
7	nsv466270	chr9:17236376-17377629	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Genic enhancers Bivalent/Poised TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
8	nsv613694	chr9:17236376-17377629	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent/Poised TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
9	nsv892665	chr9:17250170-17371690	Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
10	nsv466271	chr9:17329964-17438391	Strong transcription Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
11	nsv613696	chr9:17329964-17438391	Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
12	nsv1015524	chr9:17350843-17419424	Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:64 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:17338800-17371800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
2	chr9:17341400-17369600	Weak transcription	Placenta Amnion	Placenta Amnion
3	chr9:17344400-17368800	Weak transcription	A549	lung
4	chr9:17355600-17372200	Weak transcription	Primary hematopoietic stem cells	blood
5	chr9:17362000-17369400	Weak transcription	Fetal Kidney	kidney
6	chr9:17362000-17372600	Weak transcription	HUES6 Cell Line	embryonic stem cell
7	chr9:17362000-17394600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
8	chr9:17364200-17368800	Weak transcription	Brain Substantia Nigra	brain
9	chr9:17364600-17369000	Weak transcription	Skeletal Muscle Female	skeletal muscle
10	chr9:17364600-17376800	Weak transcription	Hela-S3	cervix
11	chr9:17365000-17369400	Weak transcription	Rectal Smooth Muscle	rectum
12	chr9:17365000-17370000	Strong transcription	Fetal Stomach	stomach
13	chr9:17365000-17373600	Weak transcription	HSMM	muscle
14	chr9:17365600-17369200	Strong transcription	Left Ventricle	heart
15	chr9:17365600-17370000	Weak transcription	Sigmoid Colon	Sigmoid Colon
16	chr9:17365600-17370200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
17	chr9:17366000-17369000	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
18	chr9:17366200-17369000	Weak transcription	NHLF	lung
19	chr9:17366800-17370000	Strong transcription	Ovary	ovary
20	chr9:17367000-17368800	Strong transcription	Primary hematopoietic stem cells short term culture	blood
21	chr9:17367000-17368800	Strong transcription	Duodenum Smooth Muscle	Duodenum
22	chr9:17367000-17368800	ZNF genes & repeats	Lung	lung
23	chr9:17367000-17369000	Strong transcription	Breast Myoepithelial Primary Cells	Breast
24	chr9:17367000-17369000	Strong transcription	Fetal Lung	lung
25	chr9:17367000-17369000	Strong transcription	Stomach Smooth Muscle	stomach
26	chr9:17367000-17369000	ZNF genes & repeats	Monocytes-CD14+_RO01746	blood
27	chr9:17367000-17369400	Strong transcription	Fetal Muscle Trunk	muscle
28	chr9:17367000-17369800	Strong transcription	Primary neutrophils fromperipheralblood	blood
29	chr9:17367000-17370600	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
30	chr9:17367000-17371400	Strong transcription	Cortex derived primary cultured neurospheres	brain
31	chr9:17367200-17369200	Strong transcription	Fetal Muscle Leg	muscle
32	chr9:17367200-17369400	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
33	chr9:17367200-17369400	Strong transcription	Fetal Intestine Small	intestine
34	chr9:17367200-17371600	Strong transcription	Liver	Liver
35	chr9:17367400-17369000	Strong transcription	Foreskin Fibroblast Primary Cells skin02	Skin
36	chr9:17367600-17368800	Strong transcription	Foreskin Melanocyte Primary Cells skin01	Skin
37	chr9:17367600-17371200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
38	chr9:17368000-17368800	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
39	chr9:17368000-17369000	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Female	--
40	chr9:17368000-17369000	Weak transcription	Duodenum Mucosa	Duodenum
41	chr9:17368000-17369200	Weak transcription	H9 Cell Line	embryonic stem cell
42	chr9:17368000-17373000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
43	chr9:17368200-17369000	Weak transcription	Gastric	stomach
44	chr9:17368200-17369200	Weak transcription	Spleen	Spleen
45	chr9:17368200-17370400	Weak transcription	Brain Anterior Caudate	brain
46	chr9:17368200-17373800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
47	chr9:17368200-17377200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
48	chr9:17368400-17370000	Weak transcription	H1 Cell Line	embryonic stem cell
49	chr9:17368400-17370000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
50	chr9:17368400-17370000	Weak transcription	Rectal Mucosa Donor 29	rectum

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