Variant report

Variant	rs11562139
Chromosome Location	chr9:17256436-17256437
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 285 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:267)

rs_ID	r²[population]
rs10114324	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10117379	0.88[EUR][1000 genomes]
rs10119233	0.88[EUR][1000 genomes]
rs10119863	0.88[EUR][1000 genomes]
rs10119902	0.88[EUR][1000 genomes]
rs10120006	0.88[EUR][1000 genomes]
rs10120013	0.88[EUR][1000 genomes]
rs10120733	0.89[EUR][1000 genomes]
rs10120761	0.87[EUR][1000 genomes]
rs10125886	0.88[EUR][1000 genomes]
rs1023778	0.87[EUR][1000 genomes]
rs10465046	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10511633	0.82[ASN][1000 genomes]
rs10738477	0.88[EUR][1000 genomes]
rs10756861	0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10756862	0.85[AFR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10756863	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10756864	0.85[AFR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10756865	0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10810753	0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10810783	0.88[EUR][1000 genomes]
rs10810784	0.83[EUR][1000 genomes]
rs10962908	0.86[AFR][1000 genomes]
rs10962909	0.87[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs10962918	0.93[AFR][1000 genomes];0.94[AMR][1000 genomes];0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10962922	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10962923	0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10962924	0.80[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10962925	0.80[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10962926	0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10962927	0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10962928	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10962932	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10962933	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10962938	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10962939	0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10962940	0.89[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10962941	0.89[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10962942	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10962957	0.90[AFR][1000 genomes]
rs10962960	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10962961	0.81[AMR][1000 genomes]
rs10962962	0.81[AMR][1000 genomes]
rs10962963	0.81[AMR][1000 genomes]
rs10962964	0.81[AMR][1000 genomes]
rs10962965	0.81[AMR][1000 genomes]
rs10962977	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10962978	0.92[AFR][1000 genomes]
rs10962979	0.97[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10962981	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10962983	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10962984	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10962985	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10962986	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10962987	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10962989	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10963010	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10963011	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10963012	0.86[ASN][1000 genomes]
rs10963013	0.89[AFR][1000 genomes];0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10963014	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10963028	0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10963081	0.89[EUR][1000 genomes]
rs1113379	0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1113380	0.85[AFR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1113381	0.84[AFR][1000 genomes];0.90[EUR][1000 genomes]
rs1113382	0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11525918	0.89[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11531656	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11531707	0.81[AMR][1000 genomes]
rs11534160	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11536700	0.83[AMR][1000 genomes]
rs11543981	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11560447	0.83[AFR][1000 genomes]
rs11562140	0.83[AMR][1000 genomes]
rs12000610	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12235987	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12236896	0.86[AFR][1000 genomes]
rs12237062	0.85[AFR][1000 genomes]
rs12237892	0.89[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12238680	0.85[AFR][1000 genomes]
rs12238753	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12346397	0.87[AFR][1000 genomes];0.90[EUR][1000 genomes]
rs13288412	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13289731	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1348279	0.88[AFR][1000 genomes];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1372700	0.88[EUR][1000 genomes]
rs1413418	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1413419	0.80[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1442518	0.88[EUR][1000 genomes]
rs1442520	0.86[EUR][1000 genomes]
rs1442521	0.88[EUR][1000 genomes]
rs1442522	0.88[EUR][1000 genomes]
rs1442525	0.88[EUR][1000 genomes]
rs1442526	0.88[EUR][1000 genomes]
rs1576958	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1576959	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1576960	0.81[AMR][1000 genomes]
rs1582029	0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs16935416	0.91[AFR][1000 genomes]
rs1759452	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1759453	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1759457	0.89[AFR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1759458	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1759459	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1759460	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1759461	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1759462	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1759463	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1759465	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1759615	0.85[AFR][1000 genomes];0.90[EUR][1000 genomes]
rs1759616	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1759617	0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1759619	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1759626	0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1819484	0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1930639	0.93[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1930643	0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1930644	0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1930645	0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1930646	0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1930647	0.88[EUR][1000 genomes]
rs1930648	0.88[EUR][1000 genomes]
rs2010086	0.84[AFR][1000 genomes];0.91[EUR][1000 genomes]
rs2039413	0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2083695	0.83[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs2095145	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2099859	0.83[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs2104914	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2119906	0.88[EUR][1000 genomes]
rs2119907	0.88[EUR][1000 genomes]
rs2151289	0.84[ASN][1000 genomes]
rs2165688	0.84[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs2210551	0.84[EUR][1000 genomes]
rs2383010	0.81[AMR][1000 genomes]
rs2483208	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2584546	0.88[EUR][1000 genomes]
rs2593389	0.87[EUR][1000 genomes]
rs2593390	0.88[EUR][1000 genomes]
rs2774621	0.81[ASN][1000 genomes]
rs2774622	0.80[ASN][1000 genomes]
rs2774623	0.81[ASN][1000 genomes]
rs2774629	0.81[ASN][1000 genomes]
rs2779767	0.82[ASN][1000 genomes]
rs2779774	0.93[AFR][1000 genomes];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2779779	0.89[AFR][1000 genomes];0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2780204	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2780205	0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2780207	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2780214	0.87[EUR][1000 genomes]
rs2815173	0.82[ASN][1000 genomes]
rs2815177	0.83[ASN][1000 genomes]
rs2815181	0.81[ASN][1000 genomes]
rs2815182	0.81[ASN][1000 genomes]
rs2891110	0.81[AMR][1000 genomes]
rs2990958	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3119847	0.81[ASN][1000 genomes]
rs3119848	0.81[ASN][1000 genomes]
rs3739488	0.88[EUR][1000 genomes]
rs3808781	0.88[EUR][1000 genomes]
rs3808785	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3814137	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3814138	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3814139	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3891457	0.87[AFR][1000 genomes];0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4128606	0.85[ASN][1000 genomes]
rs4147023	0.80[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4289910	0.83[AFR][1000 genomes]
rs4430173	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4592125	0.82[AFR][1000 genomes]
rs4621917	0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4961529	0.82[ASN][1000 genomes]
rs4961534	0.87[ASN][1000 genomes]
rs4961551	0.83[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs4961554	0.83[AFR][1000 genomes];0.90[EUR][1000 genomes]
rs4961556	0.88[EUR][1000 genomes]
rs55829722	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs56402716	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs57290709	0.83[AMR][1000 genomes]
rs57850734	0.89[EUR][1000 genomes]
rs582134	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs585682	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs593552	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs599626	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs600041	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs600133	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs601960	0.89[AFR][1000 genomes];0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs606382	0.91[AFR][1000 genomes];0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs60691286	0.83[AMR][1000 genomes]
rs610175	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs613966	0.89[AFR][1000 genomes];0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs614412	0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs614471	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs619357	0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs620280	0.86[AFR][1000 genomes]
rs622392	0.82[EUR][1000 genomes]
rs631300	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs632176	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs632255	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs632313	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs634383	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs634446	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs636093	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs642582	0.86[AFR][1000 genomes];0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs643776	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs646025	0.86[AFR][1000 genomes];0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs647013	0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6475109	0.81[ASN][1000 genomes]
rs6475122	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6475124	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6475125	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6475126	0.90[EUR][1000 genomes]
rs6475127	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6475128	0.90[EUR][1000 genomes]
rs6475129	0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6475140	0.80[AFR][1000 genomes]
rs659637	0.88[AFR][1000 genomes];0.90[EUR][1000 genomes]
rs664447	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs672799	0.80[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs673587	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs677490	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs679666	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7018523	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7018856	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7020918	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7021738	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7023305	0.88[EUR][1000 genomes]
rs7023540	0.88[EUR][1000 genomes]
rs7025912	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7027051	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7027292	0.88[EUR][1000 genomes]
rs7027539	0.83[AFR][1000 genomes];0.90[EUR][1000 genomes]
rs7034768	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7035276	0.88[EUR][1000 genomes]
rs7035318	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7035357	0.88[EUR][1000 genomes]
rs7035386	0.80[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7035525	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7037019	0.84[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs7037041	0.92[EUR][1000 genomes]
rs7037408	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7040098	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7040666	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7042700	0.84[AFR][1000 genomes];0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7043703	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7044254	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7044783	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7046327	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7046951	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7047093	0.90[EUR][1000 genomes]
rs7848118	0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7850279	0.82[ASN][1000 genomes]
rs7862336	0.85[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs7865807	0.90[EUR][1000 genomes]
rs7868207	0.84[AFR][1000 genomes]
rs7870427	0.88[EUR][1000 genomes]
rs7874597	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7874945	0.88[EUR][1000 genomes]
rs870270	0.93[AFR][1000 genomes];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9298777	0.88[EUR][1000 genomes]
rs9298778	0.87[EUR][1000 genomes]
rs9406667	0.88[EUR][1000 genomes]
rs9407787	0.83[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs9407792	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9407793	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9407794	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9407804	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:18 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1024799	chr9:16631890-17431827	Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
2	esv2764141	chr9:16903446-17351711	Weak transcription ZNF genes & repeats Enhancers Active TSS Strong transcription Flanking Active TSS Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
3	nsv892658	chr9:17041557-17532840	Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	11 gene(s)	inside rSNPs	diseases
4	nsv892660	chr9:17134245-17269437	Flanking Bivalent TSS/Enh Enhancers Weak transcription Active TSS Strong transcription Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
5	nsv892661	chr9:17134245-17532840	Flanking Bivalent TSS/Enh Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
6	nsv428537	chr9:17146369-17308494	Weak transcription ZNF genes & repeats Strong transcription Active TSS Enhancers Flanking Active TSS Genic enhancers Bivalent/Poised TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
7	nsv613693	chr9:17147191-17710407	Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
8	nsv471287	chr9:17165698-17708814	Weak transcription Enhancers Bivalent/Poised TSS Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
9	nsv466269	chr9:17165698-17710407	Weak transcription ZNF genes & repeats Enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Active TSS Flanking Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
10	nsv892662	chr9:17168867-17329964	Strong transcription Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
11	nsv1031269	chr9:17204320-17316969	Flanking Active TSS Strong transcription Enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent/Poised TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
12	nsv1030291	chr9:17216945-17262803	Enhancers ZNF genes & repeats Weak transcription Strong transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
13	nsv466270	chr9:17236376-17377629	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Genic enhancers Bivalent/Poised TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
14	nsv613694	chr9:17236376-17377629	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent/Poised TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
15	nsv892663	chr9:17243746-17329964	ZNF genes & repeats Enhancers Strong transcription Weak transcription Active TSS Flanking Active TSS Bivalent/Poised TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
16	nsv892664	chr9:17250170-17296630	Enhancers ZNF genes & repeats Weak transcription Strong transcription Active TSS Bivalent/Poised TSS Flanking Active TSS	n/a	n/a	inside rSNPs	diseases
17	nsv892665	chr9:17250170-17371690	Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
18	nsv892666	chr9:17256043-17280616	Active TSS ZNF genes & repeats Enhancers Strong transcription Weak transcription Flanking Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:17223600-17279400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr9:17236400-17262000	Weak transcription	Ovary	ovary
3	chr9:17247400-17269000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin

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