Variant report

Variant	rs10962940
Chromosome Location	chr9:17247214-17247215
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 260 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:245)

rs_ID	r²[population]
rs10114324	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10117379	0.88[EUR][1000 genomes]
rs10119233	0.88[EUR][1000 genomes]
rs10119863	0.88[EUR][1000 genomes]
rs10119902	0.88[EUR][1000 genomes]
rs10120006	0.88[EUR][1000 genomes]
rs10120013	0.88[EUR][1000 genomes]
rs10120733	0.89[EUR][1000 genomes]
rs10120761	0.87[EUR][1000 genomes]
rs10125886	0.88[EUR][1000 genomes]
rs1023778	0.87[EUR][1000 genomes]
rs10465046	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10511633	0.83[ASN][1000 genomes]
rs10738477	0.88[EUR][1000 genomes]
rs10756861	0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10756862	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10756863	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10756864	0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10756865	0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10810753	0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10810783	0.88[EUR][1000 genomes]
rs10810784	0.83[EUR][1000 genomes]
rs10962909	0.88[ASN][1000 genomes]
rs10962918	0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10962922	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10962923	0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10962924	0.80[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10962925	0.80[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10962926	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10962927	0.82[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10962928	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10962932	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10962933	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10962938	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10962939	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10962941	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10962942	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10962957	0.82[AFR][1000 genomes]
rs10962960	0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10962977	0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10962978	0.84[AFR][1000 genomes]
rs10962979	0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10962981	0.80[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10962983	0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10962984	0.81[AFR][1000 genomes];0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10962985	0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10962986	0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10962987	0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10962989	0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10963010	0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10963011	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10963012	0.86[ASN][1000 genomes]
rs10963013	0.81[AFR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10963014	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10963028	0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10963081	0.89[EUR][1000 genomes]
rs1113379	0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1113380	0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1113381	0.90[EUR][1000 genomes]
rs1113382	0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11525918	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11531656	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11534160	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11543981	0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11562139	0.89[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12000610	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12235987	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12237892	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12238680	0.96[AFR][1000 genomes]
rs12238753	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12346397	0.90[EUR][1000 genomes]
rs13288412	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13289731	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1348279	0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1372700	0.88[EUR][1000 genomes]
rs1413418	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1413419	0.93[EUR][1000 genomes]
rs1442518	0.88[EUR][1000 genomes]
rs1442520	0.86[EUR][1000 genomes]
rs1442521	0.88[EUR][1000 genomes]
rs1442522	0.88[EUR][1000 genomes]
rs1442525	0.88[EUR][1000 genomes]
rs1442526	0.88[EUR][1000 genomes]
rs1576958	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1576959	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1582029	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16935416	0.83[AFR][1000 genomes]
rs1759452	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1759453	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1759457	0.81[AFR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1759458	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1759459	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1759460	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1759461	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1759462	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1759463	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1759465	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1759615	0.90[EUR][1000 genomes]
rs1759616	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1759617	0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1759619	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1759626	0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1819484	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1930639	0.84[AFR][1000 genomes];0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1930643	0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1930644	0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1930645	0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1930646	0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1930647	0.88[EUR][1000 genomes]
rs1930648	0.88[EUR][1000 genomes]
rs2010086	0.91[EUR][1000 genomes]
rs2039413	0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2083695	0.92[EUR][1000 genomes]
rs2095145	0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2099859	0.92[EUR][1000 genomes]
rs2104914	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2119906	0.88[EUR][1000 genomes]
rs2119907	0.88[EUR][1000 genomes]
rs2151289	0.85[ASN][1000 genomes]
rs2165688	0.85[EUR][1000 genomes]
rs2210551	0.84[EUR][1000 genomes]
rs2483208	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2584546	0.88[EUR][1000 genomes]
rs2593390	0.88[EUR][1000 genomes]
rs2774621	0.82[ASN][1000 genomes]
rs2774622	0.81[ASN][1000 genomes]
rs2774623	0.82[ASN][1000 genomes]
rs2774629	0.82[ASN][1000 genomes]
rs2779767	0.83[ASN][1000 genomes]
rs2779774	0.84[AFR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2779779	0.81[AFR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2780204	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2780205	0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2780207	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2780214	0.87[EUR][1000 genomes]
rs2815173	0.83[ASN][1000 genomes]
rs2815177	0.84[ASN][1000 genomes]
rs2815181	0.82[ASN][1000 genomes]
rs2815182	0.82[ASN][1000 genomes]
rs2990958	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3119847	0.82[ASN][1000 genomes]
rs3119848	0.82[ASN][1000 genomes]
rs3739488	0.88[EUR][1000 genomes]
rs3808781	0.88[EUR][1000 genomes]
rs3808785	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs3814137	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3814138	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3814139	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3891457	0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4128606	0.86[ASN][1000 genomes]
rs4147023	0.80[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4430173	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4621917	0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4961529	0.83[ASN][1000 genomes]
rs4961534	0.88[ASN][1000 genomes]
rs4961551	0.92[EUR][1000 genomes]
rs4961554	0.90[EUR][1000 genomes]
rs4961556	0.88[EUR][1000 genomes]
rs55829722	0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs56402716	0.89[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs57850734	0.89[EUR][1000 genomes]
rs582134	0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs585682	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs593552	0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs599626	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs600041	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs600133	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs601960	0.81[AFR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs606382	0.83[AFR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs610175	0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs613966	0.81[AFR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs614412	0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs614471	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs619357	0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs622392	0.82[EUR][1000 genomes]
rs631300	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs632176	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs632255	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs632313	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs634383	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs634446	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs636093	0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs642582	0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs643776	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs646025	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs647013	0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6475109	0.82[ASN][1000 genomes]
rs6475122	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6475124	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6475125	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6475126	0.90[EUR][1000 genomes]
rs6475127	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6475128	0.90[EUR][1000 genomes]
rs6475129	0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs659637	0.90[EUR][1000 genomes]
rs664447	0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs672799	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs673587	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs677490	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs679666	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7018523	0.86[EUR][1000 genomes]
rs7018856	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7020918	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7021738	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7023305	0.88[EUR][1000 genomes]
rs7023540	0.88[EUR][1000 genomes]
rs7025912	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7027051	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7027292	0.88[EUR][1000 genomes]
rs7027539	0.90[EUR][1000 genomes]
rs7034768	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7035276	0.88[EUR][1000 genomes]
rs7035318	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7035357	0.88[EUR][1000 genomes]
rs7035386	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7035525	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7037019	0.88[EUR][1000 genomes]
rs7037041	0.92[EUR][1000 genomes]
rs7037408	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7040098	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7040666	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7042700	0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7043703	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7044254	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7044783	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7046327	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7046951	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7047093	0.90[EUR][1000 genomes]
rs7848118	0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7850279	0.83[ASN][1000 genomes]
rs7862336	0.89[EUR][1000 genomes]
rs7864296	0.80[ASN][1000 genomes]
rs7865807	0.90[EUR][1000 genomes]
rs7870427	0.88[EUR][1000 genomes]
rs7874597	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7874945	0.88[EUR][1000 genomes]
rs870270	0.84[AFR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9298777	0.88[EUR][1000 genomes]
rs9298778	0.87[EUR][1000 genomes]
rs9406667	0.88[EUR][1000 genomes]
rs9407787	0.83[ASN][1000 genomes]
rs9407792	0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9407793	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9407794	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9407804	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:15 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1024799	chr9:16631890-17431827	Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
2	esv2764141	chr9:16903446-17351711	Weak transcription ZNF genes & repeats Enhancers Active TSS Strong transcription Flanking Active TSS Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
3	nsv892658	chr9:17041557-17532840	Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	11 gene(s)	inside rSNPs	diseases
4	nsv892660	chr9:17134245-17269437	Flanking Bivalent TSS/Enh Enhancers Weak transcription Active TSS Strong transcription Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
5	nsv892661	chr9:17134245-17532840	Flanking Bivalent TSS/Enh Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
6	nsv428537	chr9:17146369-17308494	Weak transcription ZNF genes & repeats Strong transcription Active TSS Enhancers Flanking Active TSS Genic enhancers Bivalent/Poised TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
7	nsv613693	chr9:17147191-17710407	Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
8	nsv471287	chr9:17165698-17708814	Weak transcription Enhancers Bivalent/Poised TSS Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
9	nsv466269	chr9:17165698-17710407	Weak transcription ZNF genes & repeats Enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Active TSS Flanking Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
10	nsv892662	chr9:17168867-17329964	Strong transcription Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
11	nsv1031269	chr9:17204320-17316969	Flanking Active TSS Strong transcription Enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent/Poised TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
12	nsv1030291	chr9:17216945-17262803	Enhancers ZNF genes & repeats Weak transcription Strong transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
13	nsv466270	chr9:17236376-17377629	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Genic enhancers Bivalent/Poised TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
14	nsv613694	chr9:17236376-17377629	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent/Poised TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
15	nsv892663	chr9:17243746-17329964	ZNF genes & repeats Enhancers Strong transcription Weak transcription Active TSS Flanking Active TSS Bivalent/Poised TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:40 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:17223600-17279400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr9:17229800-17251600	Weak transcription	HSMM	muscle
3	chr9:17234600-17249400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr9:17235000-17249600	Weak transcription	Dnd41	blood
5	chr9:17235800-17249400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr9:17236400-17262000	Weak transcription	Ovary	ovary
7	chr9:17240600-17248400	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr9:17240800-17248600	Weak transcription	NHDF-Ad	bronchial
9	chr9:17241000-17249800	Weak transcription	Fetal Heart	heart
10	chr9:17241200-17249000	Weak transcription	Gastric	stomach
11	chr9:17241400-17249400	Weak transcription	Right Ventricle	heart
12	chr9:17244600-17249600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
13	chr9:17244800-17248600	Weak transcription	Muscle Satellite Cultured Cells	--
14	chr9:17245600-17248000	ZNF genes & repeats	Primary hematopoietic stem cells	blood
15	chr9:17246000-17247600	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
16	chr9:17246000-17248400	ZNF genes & repeats	Fetal Lung	lung
17	chr9:17246400-17247400	ZNF genes & repeats	Adipose Nuclei	Adipose
18	chr9:17246400-17247600	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
19	chr9:17246400-17247600	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Female	--
20	chr9:17246400-17248200	ZNF genes & repeats	Fetal Muscle Leg	muscle
21	chr9:17246400-17249400	Weak transcription	Small Intestine	intestine
22	chr9:17246600-17247400	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
23	chr9:17246600-17247400	Strong transcription	Foreskin Melanocyte Primary Cells skin01	Skin
24	chr9:17246600-17247400	Strong transcription	Fetal Muscle Trunk	muscle
25	chr9:17246600-17247800	Strong transcription	Aorta	Aorta
26	chr9:17246600-17247800	Strong transcription	Liver	Liver
27	chr9:17246800-17247400	ZNF genes & repeats	Fetal Brain Female	brain
28	chr9:17246800-17248000	Strong transcription	Monocytes-CD14+_RO01746	blood
29	chr9:17247000-17247400	ZNF genes & repeats	Cortex derived primary cultured neurospheres	brain
30	chr9:17247000-17247400	Strong transcription	Foreskin Fibroblast Primary Cells skin02	Skin
31	chr9:17247000-17247600	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
32	chr9:17247000-17247800	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
33	chr9:17247000-17248000	Strong transcription	Left Ventricle	heart
34	chr9:17247000-17248000	ZNF genes & repeats	Pancreas	Pancrea
35	chr9:17247000-17248200	ZNF genes & repeats	Duodenum Smooth Muscle	Duodenum
36	chr9:17247200-17247400	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
37	chr9:17247200-17247600	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
38	chr9:17247200-17247600	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood
39	chr9:17247200-17247800	Strong transcription	Fetal Stomach	stomach
40	chr9:17247200-17251000	Weak transcription	Fetal Kidney	kidney

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