Variant report

Variant	rs2169480
Chromosome Location	chr15:34635369-34635370
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr15:34635303-34635599	GM10266	blood:	n/a	chr15:34635436-34635457 chr15:34635437-34635450 chr15:34635435-34635451 chr15:34635434-34635452 chr15:34635437-34635450
2	CTCF	chr15:34635145-34635760	MCF-7	breast:	n/a	chr15:34635436-34635457 chr15:34635437-34635450 chr15:34635435-34635451 chr15:34635434-34635452 chr15:34635437-34635450
3	MBD4	chr15:34635093-34635657	HepG2	liver:	n/a	n/a
4	MYC	chr15:34635146-34635624	HUVEC	blood vessel:	n/a	chr15:34635500-34635507 chr15:34635341-34635350 chr15:34635340-34635351 chr15:34635342-34635351 chr15:34635499-34635508 chr15:34635343-34635350
5	MYC	chr15:34635052-34635784	K562	blood:	n/a	chr15:34635500-34635507 chr15:34635341-34635350 chr15:34635340-34635351 chr15:34635342-34635351 chr15:34635499-34635508 chr15:34635343-34635350
6	STAT3	chr15:34635279-34635515	MCF10A-Er-Src	breast:	n/a	n/a
7	POLR2A	chr15:34634902-34635591	U87	brain:	n/a	n/a
8	MAFK	chr15:34635104-34635618	HepG2	liver:	n/a	chr15:34635309-34635325
9	POLR2A	chr15:34635034-34635490	GM12878	blood:	n/a	n/a
10	RAD21	chr15:34635193-34635709	HepG2	liver:	n/a	chr15:34635436-34635450 chr15:34635435-34635454
11	CTCF	chr15:34635308-34635642	H1-hESC	embryonic stem cell:	n/a	chr15:34635436-34635457 chr15:34635437-34635450 chr15:34635435-34635451 chr15:34635434-34635452 chr15:34635437-34635450
12	RAD21	chr15:34635111-34635689	Hela-S3	cervix:	n/a	chr15:34635436-34635450 chr15:34635435-34635454
13	CEBPB	chr15:34635201-34635429	MCF-7	breast:	n/a	n/a
14	ZKSCAN1	chr15:34635069-34635917	Hela-S3	cervix:	n/a	n/a
15	HDAC2	chr15:34635152-34635559	K562	blood:	n/a	n/a
16	BCL3	chr15:34634994-34635819	A549	lung:	n/a	n/a
17	STAT3	chr15:34635169-34635487	MCF10A-Er-Src	breast:	n/a	n/a
18	MAX	chr15:34635017-34635966	H1-hESC	embryonic stem cell:	n/a	chr15:34635500-34635507 chr15:34635341-34635350 chr15:34635340-34635351 chr15:34635342-34635351 chr15:34635499-34635508 chr15:34635343-34635350
19	TAF1	chr15:34635041-34635564	Hela-S3	cervix:	n/a	n/a
20	EGR1	chr15:34635194-34635546	GM12878	blood:	n/a	chr15:34635388-34635412
21	TAL1	chr15:34635133-34635596	K562	blood:	n/a	n/a
22	ATF3	chr15:34635188-34635600	H1-hESC	embryonic stem cell:	n/a	n/a
23	POLR2A	chr15:34635040-34635658	Hela-S3	cervix:	n/a	n/a
24	ELF1	chr15:34635038-34635827	HCT-116	colon:	n/a	chr15:34635370-34635381 chr15:34635370-34635381 chr15:34635371-34635380
25	EP300	chr15:34635109-34635602	GM12878	blood:	n/a	chr15:34635373-34635380
26	CTCF	chr15:34635256-34635549	K562	blood:	n/a	chr15:34635436-34635457 chr15:34635437-34635450 chr15:34635435-34635451 chr15:34635434-34635452 chr15:34635437-34635450
27	SRF	chr15:34635205-34635545	K562	blood:	n/a	n/a
28	CTCF	chr15:34635360-34635510	HMEC	breast:	n/a	chr15:34635436-34635457 chr15:34635437-34635450 chr15:34635435-34635451 chr15:34635434-34635452 chr15:34635437-34635450
29	JUND	chr15:34635330-34635553	H1-hESC	embryonic stem cell:	n/a	n/a
30	TCF7L2	chr15:34635045-34635639	Hela-S3	cervix:	n/a	n/a
31	CTCF	chr15:34635310-34635557	GM13976	blood:	n/a	chr15:34635436-34635457 chr15:34635437-34635450 chr15:34635435-34635451 chr15:34635434-34635452 chr15:34635437-34635450
32	MAX	chr15:34635049-34635769	MCF-7	breast:	n/a	chr15:34635500-34635507 chr15:34635341-34635350 chr15:34635340-34635351 chr15:34635342-34635351 chr15:34635499-34635508 chr15:34635343-34635350
33	POLR2A	chr15:34635028-34635593	A549	lung:	n/a	n/a
34	POLR2A	chr15:34635113-34635605	K562	blood:	n/a	n/a
35	POLR2A	chr15:34634956-34635567	SK-N-SH	brain:	n/a	n/a
36	CTCF	chr15:34635360-34635510	GM12868	blood:	n/a	chr15:34635436-34635457 chr15:34635437-34635450 chr15:34635435-34635451 chr15:34635434-34635452 chr15:34635437-34635450
37	CTCF	chr15:34635293-34635597	GM12892	blood:	n/a	chr15:34635436-34635457 chr15:34635437-34635450 chr15:34635435-34635451 chr15:34635434-34635452 chr15:34635437-34635450
38	RCOR1	chr15:34635160-34635713	Hela-S3	cervix:	n/a	n/a
39	USF1	chr15:34635034-34635583	K562	blood:	n/a	chr15:34635339-34635350
40	ATF3	chr15:34635165-34635558	K562	blood:	n/a	n/a
41	CHD1	chr15:34635078-34635657	GM12878	blood:	n/a	n/a
42	MAX	chr15:34634933-34635889	ECC-1	luminal epithelium:	n/a	chr15:34635500-34635507 chr15:34635341-34635350 chr15:34635340-34635351 chr15:34635342-34635351 chr15:34635499-34635508 chr15:34635343-34635350
43	CTCFL	chr15:34635306-34635481	K562	blood:	n/a	n/a
44	POLR2A	chr15:34634995-34635574	SK-N-MC	brain:	n/a	n/a
45	PML	chr15:34635040-34635551	K562	blood:	n/a	n/a
46	ELF1	chr15:34635020-34635630	A549	lung:	n/a	chr15:34635370-34635381 chr15:34635370-34635381 chr15:34635371-34635380
47	POLR2A	chr15:34634900-34635727	SK-N-MC	brain:	n/a	n/a
48	EP300	chr15:34635153-34635720	GM12878	blood:	n/a	chr15:34635373-34635380
49	MYC	chr15:34635255-34635674	Hela-S3	cervix:	n/a	chr15:34635500-34635507 chr15:34635341-34635350 chr15:34635340-34635351 chr15:34635342-34635351 chr15:34635499-34635508 chr15:34635343-34635350
50	SP1	chr15:34634881-34635806	A549	lung:	n/a	chr15:34635671-34635678

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:34635330-34635380	HRCEpiC	kidney:	n/a
2	chr15:34635330-34635380	AoSMC	blood vessel:	n/a
3	chr15:34635330-34635380	HCM	heart:	n/a
4	chr15:34635330-34635380	U87	brain:	n/a
5	chr15:34635330-34635380	SKMC	muscle:	n/a
6	chr15:34635330-34635380	NB4	blood:	n/a
7	chr15:34635330-34635380	PrEC	prostate:	n/a
8	chr15:34635330-34635380	HCT-116	colon:	n/a
9	chr15:34635330-34635380	T-47D	breast:	n/a
10	chr15:34635330-34635380	GM12878	blood:	n/a
11	chr15:34635330-34635380	HCF	heart:	n/a
12	chr15:34635330-34635380	HCPEpiC	choroid plexus:	n/a
13	chr15:34635330-34635380	NH-A	brain:	n/a
14	chr15:34635330-34635380	HepG2	liver:	n/a
15	chr15:34635330-34635380	GM12892	blood:	n/a
16	chr15:34635330-34635380	AG10803	skin:	n/a
17	chr15:34635330-34635380	HRE	kidney:	n/a
18	chr15:34635330-34635380	GM19239	blood:	n/a
19	chr15:34635330-34635380	MCF10A-Er-Src	breast:	n/a
20	chr15:34635330-34635380	SK-N-MC	brain:	n/a
21	chr15:34635330-34635380	AG09309	skin:	n/a
22	chr15:34635330-34635380	Hela-S3	cervix:	n/a
23	chr15:34635330-34635380	PANC-1	pancreas:	n/a
24	chr15:34635330-34635380	HEEpiC	esophagus:	n/a
25	chr15:34635330-34635380	HMEC	breast:	n/a
26	chr15:34635330-34635380	K562	blood:	n/a
27	chr15:34635330-34635380	Hepatocyte	liver:	n/a
28	chr15:34635330-34635380	HAEpiC	amniotic membrane:	n/a
29	chr15:34635330-34635380	H1-hESC	embryonic stem cell:	embryo
30	chr15:34635330-34635380	HEK293	kidney:	embryo
31	chr15:34635330-34635380	HPAEpiC	pulmonary alveolar:	n/a
32	chr15:34635330-34635380	HRPEpiC	eye:	n/a
33	chr15:34635330-34635380	GM06990	blood:	n/a
34	chr15:34635330-34635380	AG04450	lung:	fetal
35	chr15:34635330-34635380	BJ	skin:	n/a
36	chr15:34635330-34635380	CMK	blood:	n/a
37	chr15:34635330-34635380	HL-60	blood:	n/a
38	chr15:34635330-34635380	LNCaP	prostate:	n/a
39	chr15:34635330-34635380	HUVEC	blood vessel:	n/a
40	chr15:34635330-34635380	IMR90	lung:	fetal
41	chr15:34635330-34635380	GM12891	blood:	n/a
42	chr15:34635330-34635380	RPTEC	kidney:	n/a
43	chr15:34635330-34635380	BE2_C	brain:	n/a
44	chr15:34635330-34635380	NT2-D1	testis:	n/a
45	chr15:34635330-34635380	HNPCEpiC	eye:	n/a
46	chr15:34635330-34635380	AG09319	gingival:	n/a
47	chr15:34635330-34635380	Caco-2	colon:	n/a
48	chr15:34635330-34635380	ECC-1	luminal epithelium:	n/a
49	chr15:34635330-34635380	MCF-7	breast:	n/a
50	chr15:34635330-34635380	A549	lung:	n/a

No.	Distal block	Cell Line	Cell type
1	chr15:34634571..34635945-chr15:34658808..34660439,12	MCF-7	breast:
2	chr15:34632008..34636763-chr15:34655757..34660926,8	K562	blood:
3	chr15:34635280..34637526-chr15:34658001..34660457,2	K562	blood:
4	chr15:34635057..34636788-chr15:34655744..34657443,2	MCF-7	breast:
5	chr15:34633629..34635584-chr15:34657779..34659599,2	MCF-7	breast:
6	chr15:34628783..34632143-chr15:34633761..34637127,4	MCF-7	breast:
7	chr15:34632759..34637829-chr15:34654252..34657716,5	K562	blood:
8	chr15:34633865..34636798-chr15:34637017..34639359,2	K562	blood:
9	chr15:34633689..34636672-chr15:34659379..34661265,2	MCF-7	breast:
10	chr15:34633931..34636680-chr15:34728775..34730381,2	K562	blood:
11	chr15:34635005..34635906-chr15:34659046..34660693,6	K562	blood:

Variant related genes	Relation type
NOP10	TF binding region
NUTM1	TF binding region
NOP10	CpG island
NUTM1	CpG island
ENSG00000184507	Chromatin interaction
ENSG00000175265	Chromatin interaction
ENSG00000140199	Chromatin interaction
ENSG00000176454	Chromatin interaction

Extended variants
information (count: 42 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10851947	1.00[JPT][hapmap]
rs11639176	1.00[JPT][hapmap]
rs11853022	1.00[JPT][hapmap]
rs17236770	1.00[ASW][hapmap]
rs17236847	1.00[JPT][hapmap]
rs17817854	1.00[JPT][hapmap]
rs2169479	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4587944	1.00[JPT][hapmap]
rs7163031	1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:33 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1052804	chr15:34498529-34841447	Active TSS Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
2	nsv542341	chr15:34498529-34841447	Weak transcription Bivalent/Poised TSS Active TSS Flanking Active TSS Strong transcription Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
3	esv1798578	chr15:34543021-34988247	Enhancers Weak transcription Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
4	esv1804312	chr15:34543021-34988247	Weak transcription Flanking Active TSS Strong transcription Enhancers Genic enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
5	esv1821622	chr15:34543021-34988247	Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
6	esv1850950	chr15:34543021-34988247	Active TSS Weak transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
7	esv2758376	chr15:34543021-34988247	Flanking Bivalent TSS/Enh Enhancers Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
8	esv2760024	chr15:34543021-34988247	Flanking Active TSS Enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
9	nsv428303	chr15:34543021-34988247	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Strong transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
10	nsv1036475	chr15:34552879-34841587	Bivalent/Poised TSS Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
11	nsv542342	chr15:34552879-34841587	Active TSS Weak transcription Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
12	nsv1048550	chr15:34553078-34841447	Flanking Active TSS Enhancers Active TSS Weak transcription Strong transcription Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
13	nsv542343	chr15:34553078-34841447	Active TSS Genic enhancers Enhancers Flanking Active TSS Bivalent/Poised TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
14	nsv471682	chr15:34560451-34882630	Enhancers Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
15	nsv469547	chr15:34594557-34757807	Genic enhancers Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	33 gene(s)	inside rSNPs	diseases
16	nsv482528	chr15:34594557-34757807	Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	33 gene(s)	inside rSNPs	diseases
17	esv1817014	chr15:34598601-34911177	Flanking Active TSS Enhancers Strong transcription Genic enhancers Weak transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
18	esv1817924	chr15:34598601-34911177	Bivalent/Poised TSS Weak transcription Active TSS Enhancers Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
19	esv1847172	chr15:34598601-34911177	Enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
20	esv1802396	chr15:34598601-34988247	Flanking Active TSS Active TSS Enhancers Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
21	esv1809360	chr15:34598601-34988247	Enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Weak transcription Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
22	esv1844776	chr15:34598601-34988247	Enhancers Weak transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
23	nsv427957	chr15:34598601-34988247	Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
24	nsv1039577	chr15:34624178-34962093	Bivalent Enhancer Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
25	nsv542344	chr15:34624178-34962093	Active TSS Enhancers Strong transcription Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
26	nsv542345	chr15:34626815-34841586	Strong transcription Weak transcription Active TSS Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
27	nsv542346	chr15:34627015-34841447	Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Active TSS Enhancers Strong transcription Bivalent/Poised TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
28	nsv915918	chr15:34627109-34841422	Weak transcription Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
29	nsv916680	chr15:34627109-34964198	Active TSS Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	40 gene(s)	inside rSNPs	diseases
30	esv1822549	chr15:34628041-34909164	Weak transcription Bivalent Enhancer Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
31	nsv1038524	chr15:34628041-34962093	Flanking Bivalent TSS/Enh Enhancers Strong transcription Weak transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
32	nsv542347	chr15:34628041-34962093	Active TSS Weak transcription Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
33	nsv1042687	chr15:34635218-35000806	Bivalent/Poised TSS Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	41 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:34633800-34635400	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr15:34633800-34635400	Transcr. at gene 5' and 3'	Primary T helper 17 cells PMA-I stimulated	--
3	chr15:34634000-34635400	Transcr. at gene 5' and 3'	Primary T helper naive cells fromperipheralblood	blood
4	chr15:34634000-34635600	Active TSS	Colonic Mucosa	Colon
5	chr15:34634000-34635800	Active TSS	Fetal Kidney	kidney
6	chr15:34634200-34635400	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr15:34634200-34635400	Active TSS	Muscle Satellite Cultured Cells	--
8	chr15:34634200-34635400	Active TSS	Brain Inferior Temporal Lobe	brain
9	chr15:34634200-34635400	Active TSS	NHLF	lung
10	chr15:34634200-34635600	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
11	chr15:34634200-34635800	Active TSS	iPS-20b Cell Line	embryonic stem cell
12	chr15:34634200-34635800	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
13	chr15:34634200-34635800	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
14	chr15:34634200-34636000	Active TSS	ES-I3 Cell Line	embryonic stem cell
15	chr15:34634200-34636000	Active TSS	H9 Cell Line	embryonic stem cell
16	chr15:34634200-34636000	Active TSS	iPS-15b Cell Line	embryonic stem cell
17	chr15:34634400-34635400	Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
18	chr15:34634400-34635400	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
19	chr15:34634400-34635400	Active TSS	iPS-18 Cell Line	embryonic stem cell
20	chr15:34634400-34635400	Active TSS	Primary hematopoietic stem cells short term culture	blood
21	chr15:34634400-34635400	Active TSS	Primary T helper cells PMA-I stimulated	--
22	chr15:34634400-34635400	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
23	chr15:34634400-34635400	Active TSS	Aorta	Aorta
24	chr15:34634400-34635400	Active TSS	Esophagus	oesophagus
25	chr15:34634400-34635400	Active TSS	Fetal Intestine Large	intestine
26	chr15:34634400-34635400	Active TSS	Gastric	stomach
27	chr15:34634400-34635400	Active TSS	Lung	lung
28	chr15:34634400-34635400	Active TSS	Ovary	ovary
29	chr15:34634400-34635400	Active TSS	Pancreas	Pancrea
30	chr15:34634400-34635400	Active TSS	Psoas Muscle	Psoas
31	chr15:34634400-34635400	Active TSS	Right Ventricle	heart
32	chr15:34634400-34635400	Active TSS	Sigmoid Colon	Sigmoid Colon
33	chr15:34634400-34635400	Active TSS	Dnd41	blood
34	chr15:34634400-34635400	Active TSS	GM12878-XiMat	blood
35	chr15:34634400-34635400	Active TSS	HMEC	breast
36	chr15:34634400-34635400	Active TSS	HSMM	muscle
37	chr15:34634400-34635400	Active TSS	HUVEC	blood vessel
38	chr15:34634400-34635400	Active TSS	K562	blood
39	chr15:34634400-34635600	Active TSS	H1 Cell Line	embryonic stem cell
40	chr15:34634400-34635600	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
41	chr15:34634400-34635600	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
42	chr15:34634400-34635600	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
43	chr15:34634400-34635600	Active TSS	HUES48 Cell Line	embryonic stem cell
44	chr15:34634400-34635600	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
45	chr15:34634400-34635600	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
46	chr15:34634400-34635600	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
47	chr15:34634400-34635600	Active TSS	Brain Hippocampus Middle	brain
48	chr15:34634400-34635600	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
49	chr15:34634400-34635600	Active TSS	Duodenum Smooth Muscle	Duodenum
50	chr15:34634400-34635600	Active TSS	Fetal Intestine Small	intestine

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