The 2.0 version of rSNPBase

Variant report

Variant rs219947
Chromosome Location chr6:12155393-12155394
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:12122200-12161800 Weak transcription Rectal Smooth Muscle rectum
2 chr6:12137000-12163600 Weak transcription Small Intestine intestine
3 chr6:12139000-12161600 Weak transcription HepG2 liver
4 chr6:12140200-12161800 Weak transcription H9 Cell Line embryonic stem cell
5 chr6:12140600-12155400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr6:12140600-12158400 Weak transcription Aorta Aorta
7 chr6:12140600-12158600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr6:12140600-12158800 Weak transcription Primary hematopoietic stem cells short term culture blood
9 chr6:12140600-12161400 Weak transcription Primary T helper naive cells fromperipheralblood blood
10 chr6:12140600-12161400 Weak transcription Pancreas Pancrea
11 chr6:12140600-12161400 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr6:12140600-12161400 Weak transcription Spleen Spleen
13 chr6:12140600-12161600 Weak transcription Esophagus oesophagus
14 chr6:12140600-12161800 Weak transcription Gastric stomach
15 chr6:12140600-12163600 Weak transcription Primary hematopoietic stem cells blood
16 chr6:12140600-12163600 Weak transcription Psoas Muscle Psoas
17 chr6:12140600-12163800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
18 chr6:12140800-12155400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr6:12140800-12156200 Weak transcription Primary T regulatory cells fromperipheralblood blood
20 chr6:12140800-12158600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
21 chr6:12140800-12158800 Weak transcription Fetal Stomach stomach
22 chr6:12140800-12160400 Weak transcription Primary B cells from cord blood blood
23 chr6:12140800-12160400 Weak transcription Primary T cells fromperipheralblood blood
24 chr6:12140800-12160600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr6:12140800-12161000 Weak transcription Adipose Nuclei Adipose
26 chr6:12140800-12161400 Weak transcription Thymus Thymus
27 chr6:12140800-12161600 Weak transcription Primary B cells from peripheral blood blood
28 chr6:12140800-12161600 Weak transcription Duodenum Smooth Muscle Duodenum
29 chr6:12140800-12161800 Weak transcription HUES6 Cell Line embryonic stem cell
30 chr6:12140800-12161800 Weak transcription iPS-18 Cell Line embryonic stem cell
31 chr6:12140800-12161800 Weak transcription Primary T helper cells PMA-I stimulated --
32 chr6:12140800-12162800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
33 chr6:12141000-12155400 Weak transcription Fetal Intestine Small intestine
34 chr6:12141000-12158600 Weak transcription Fetal Kidney kidney
35 chr6:12141000-12161600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
36 chr6:12141000-12161600 Weak transcription Fetal Adrenal Gland Adrenal Gland
37 chr6:12141000-12161800 Weak transcription Stomach Smooth Muscle stomach
38 chr6:12141200-12162400 Weak transcription Rectal Mucosa Donor 31 rectum
39 chr6:12141800-12155400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr6:12141800-12161600 Weak transcription HUES48 Cell Line embryonic stem cell
41 chr6:12148000-12161800 Weak transcription iPS-20b Cell Line embryonic stem cell
42 chr6:12148800-12158800 Weak transcription Lung lung
43 chr6:12148800-12161400 Weak transcription Left Ventricle heart
44 chr6:12149400-12159400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr6:12149400-12160200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr6:12149400-12160200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr6:12149400-12160400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr6:12149400-12160400 Weak transcription HSMMtube muscle
49 chr6:12149400-12160600 Weak transcription Fetal Thymus thymus
50 chr6:12149400-12161000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015