The 2.0 version of rSNPBase

Variant report

Variant rs58853119
Chromosome Location chr6:12126698-12126699
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:12091000-12130600 Weak transcription Psoas Muscle Psoas
2 chr6:12116000-12128000 Weak transcription Fetal Heart heart
3 chr6:12117200-12136800 Weak transcription Brain Cingulate Gyrus brain
4 chr6:12118400-12138400 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr6:12118800-12131400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr6:12119400-12129800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
7 chr6:12119600-12126800 Strong transcription HUES64 Cell Line embryonic stem cell
8 chr6:12119800-12138800 Weak transcription iPS-15b Cell Line embryonic stem cell
9 chr6:12120000-12128800 Strong transcription Liver Liver
10 chr6:12120200-12129000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr6:12120400-12128200 Strong transcription HSMM muscle
12 chr6:12120400-12129000 Strong transcription Breast Myoepithelial Primary Cells Breast
13 chr6:12121400-12128000 Weak transcription Primary monocytes fromperipheralblood blood
14 chr6:12121400-12128000 Weak transcription Primary neutrophils fromperipheralblood blood
15 chr6:12121400-12150200 Weak transcription Fetal Brain Male brain
16 chr6:12121600-12136800 Weak transcription Hela-S3 cervix
17 chr6:12122000-12134600 Weak transcription Brain Inferior Temporal Lobe brain
18 chr6:12122000-12136600 Weak transcription Osteobl bone
19 chr6:12122000-12138200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr6:12122200-12128400 Weak transcription Monocytes-CD14+_RO01746 blood
21 chr6:12122200-12132200 Weak transcription A549 lung
22 chr6:12122200-12132200 Weak transcription NHLF lung
23 chr6:12122200-12137600 Weak transcription Brain Anterior Caudate brain
24 chr6:12122200-12137600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
25 chr6:12122200-12137600 Weak transcription Brain Substantia Nigra brain
26 chr6:12122200-12137800 Weak transcription HMEC breast
27 chr6:12122200-12138600 Weak transcription Colonic Mucosa Colon
28 chr6:12122200-12138600 Weak transcription Placenta Amnion Placenta Amnion
29 chr6:12122200-12138600 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr6:12122200-12138800 Weak transcription Ovary ovary
31 chr6:12122200-12138800 Weak transcription Stomach Smooth Muscle stomach
32 chr6:12122200-12139000 Weak transcription Spleen Spleen
33 chr6:12122200-12139200 Weak transcription Cortex derived primary cultured neurospheres brain
34 chr6:12122200-12161800 Weak transcription Rectal Smooth Muscle rectum
35 chr6:12122400-12126800 Strong transcription GM12878-XiMat blood
36 chr6:12122400-12130600 Weak transcription Pancreas Pancrea
37 chr6:12122400-12136400 Weak transcription Small Intestine intestine
38 chr6:12122400-12138200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
39 chr6:12122400-12138600 Weak transcription Lung lung
40 chr6:12122400-12139200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr6:12122400-12139200 Weak transcription Placenta Placenta
42 chr6:12122400-12139800 Weak transcription Esophagus oesophagus
43 chr6:12122600-12136000 Weak transcription Fetal Lung lung
44 chr6:12122600-12138200 Weak transcription Primary B cells from cord blood blood
45 chr6:12122600-12139000 Weak transcription Duodenum Smooth Muscle Duodenum
46 chr6:12122800-12128400 Weak transcription Muscle Satellite Cultured Cells --
47 chr6:12122800-12130000 Weak transcription iPS-20b Cell Line embryonic stem cell
48 chr6:12122800-12130200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr6:12122800-12132800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr6:12122800-12137200 Weak transcription NHDF-Ad bronchial

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Last update: Aug 31, 2015