Variant report

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs17109649	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs172711	0.99[ASN][1000 genomes]
rs1816146	0.99[ASN][1000 genomes]
rs182610	0.99[ASN][1000 genomes]
rs191991	0.99[ASN][1000 genomes]
rs221445	0.91[ASN][1000 genomes]
rs221446	0.89[ASN][1000 genomes]
rs221451	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs221452	0.94[ASN][1000 genomes]
rs221453	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs221455	0.93[ASN][1000 genomes]
rs221457	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs221459	0.96[ASN][1000 genomes]
rs221465	0.87[ASN][1000 genomes]
rs221467	0.89[ASN][1000 genomes]
rs221468	0.88[ASN][1000 genomes]
rs221469	0.83[ASN][1000 genomes]
rs221471	0.97[ASN][1000 genomes]
rs221473	0.97[ASN][1000 genomes]
rs221474	0.84[ASN][1000 genomes]
rs221481	1.00[ASN][1000 genomes]
rs221482	1.00[ASN][1000 genomes]
rs221483	0.99[ASN][1000 genomes]
rs221485	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs221497	0.92[AFR][1000 genomes];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs221511	0.97[ASN][1000 genomes]
rs221512	0.91[ASN][1000 genomes]
rs221513	0.91[ASN][1000 genomes]
rs221516	0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2543584	0.91[ASN][1000 genomes]
rs55933035	0.90[ASN][1000 genomes]
rs9323675	0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1045241	chr14:79885361-80734201	Weak transcription Enhancers Active TSS Bivalent/Poised TSS Flanking Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
2	nsv1039622	chr14:79908702-80266601	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Genic enhancers Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv869542	chr14:80009619-80118315	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	esv1834615	chr14:80098883-80114863	Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region lncRNA	1 gene(s)	inside rSNPs	diseases
5	esv1838840	chr14:80098883-80114863	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region lncRNA	1 gene(s)	inside rSNPs	diseases
6	nsv511536	chr14:80098883-80115560	Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:80096600-80099600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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