Variant report

Variant	rs2216514
Chromosome Location	chr4:106756352-106756353
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:106726178..106728483-chr4:106755160..106757893,2	K562	blood:

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10049527	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11930244	0.81[ASN][1000 genomes]
rs11936611	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11942577	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17036158	0.82[ASN][1000 genomes]
rs17036254	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2193852	0.82[ASN][1000 genomes]
rs2193853	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2193854	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4698951	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4699199	0.82[ASN][1000 genomes]
rs57623715	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60861135	0.82[ASN][1000 genomes]
rs6825379	0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6826631	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6829915	0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6843771	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7658055	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7665588	0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]

No data

Chromatin state (count:70 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:106695200-106757000	Weak transcription	Primary B cells from cord blood	blood
2	chr4:106729200-106763400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr4:106730200-106764200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr4:106730400-106756400	Weak transcription	Fetal Stomach	stomach
5	chr4:106730400-106757600	Weak transcription	Psoas Muscle	Psoas
6	chr4:106730800-106761800	Weak transcription	HSMM	muscle
7	chr4:106734400-106756400	Weak transcription	Fetal Thymus	thymus
8	chr4:106737000-106768600	Weak transcription	Duodenum Smooth Muscle	Duodenum
9	chr4:106738800-106757200	Weak transcription	Sigmoid Colon	Sigmoid Colon
10	chr4:106741600-106756400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
11	chr4:106742000-106761200	Weak transcription	HSMMtube	muscle
12	chr4:106742000-106763600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
13	chr4:106742000-106766200	Weak transcription	Rectal Smooth Muscle	rectum
14	chr4:106742200-106757000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
15	chr4:106742400-106766600	Weak transcription	Aorta	Aorta
16	chr4:106743400-106757000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr4:106743600-106768600	Weak transcription	Primary T helper cells fromperipheralblood	blood
18	chr4:106744000-106768600	Weak transcription	Adipose Nuclei	Adipose
19	chr4:106744200-106764400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
20	chr4:106744800-106756600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
21	chr4:106745000-106763800	Weak transcription	H1 Cell Line	embryonic stem cell
22	chr4:106745200-106759400	Weak transcription	HUES64 Cell Line	embryonic stem cell
23	chr4:106745400-106757600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
24	chr4:106745600-106756400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
25	chr4:106745800-106769000	Weak transcription	Primary B cells from peripheral blood	blood
26	chr4:106746000-106756400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
27	chr4:106746000-106772200	Weak transcription	Left Ventricle	heart
28	chr4:106746400-106776400	Weak transcription	Gastric	stomach
29	chr4:106747000-106768200	Weak transcription	K562	blood
30	chr4:106747000-106771800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
31	chr4:106747400-106757200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
32	chr4:106747400-106767000	Weak transcription	A549	lung
33	chr4:106747400-106772000	Weak transcription	Fetal Intestine Large	intestine
34	chr4:106748200-106763200	Weak transcription	HUES48 Cell Line	embryonic stem cell
35	chr4:106748600-106756400	Weak transcription	HUES6 Cell Line	embryonic stem cell
36	chr4:106748600-106756400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
37	chr4:106748600-106756400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
38	chr4:106748600-106756400	Weak transcription	Thymus	Thymus
39	chr4:106751200-106766200	Weak transcription	Stomach Smooth Muscle	stomach
40	chr4:106751800-106767800	Weak transcription	NH-A	brain
41	chr4:106752600-106762200	Weak transcription	Fetal Muscle Leg	muscle
42	chr4:106752600-106764200	Weak transcription	Brain Hippocampus Middle	brain
43	chr4:106752600-106766600	Weak transcription	H9 Cell Line	embryonic stem cell
44	chr4:106753800-106772000	Weak transcription	Duodenum Mucosa	Duodenum
45	chr4:106754000-106757800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
46	chr4:106754000-106766400	Weak transcription	Rectal Mucosa Donor 29	rectum
47	chr4:106754200-106756400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
48	chr4:106754200-106757000	Weak transcription	NHEK	skin
49	chr4:106754200-106760000	Weak transcription	Brain Substantia Nigra	brain
50	chr4:106754600-106756400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

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