The 2.0 version of rSNPBase

Variant report

Variant rs2246034
Chromosome Location chr10:6092164-6092165
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:6085800-6092400 Enhancers Primary Natural Killer cells fromperipheralblood blood
2 chr10:6086000-6093000 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --
3 chr10:6087800-6092200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
4 chr10:6087800-6092600 Weak transcription Monocytes-CD14+_RO01746 blood
5 chr10:6088200-6092200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
6 chr10:6089800-6092200 Enhancers Primary B cells from peripheral blood blood
7 chr10:6090200-6092200 Enhancers Primary T helper naive cells fromperipheralblood blood
8 chr10:6090600-6092200 Enhancers Primary B cells from cord blood blood
9 chr10:6090600-6092400 Enhancers Duodenum Mucosa Duodenum
10 chr10:6090600-6092600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr10:6091200-6092400 Enhancers Primary T killer naive cells fromperipheralblood blood
12 chr10:6091200-6092600 Enhancers Fetal Thymus thymus
13 chr10:6091200-6092800 Flanking Active TSS GM12878-XiMat blood
14 chr10:6091400-6092200 Enhancers Primary T cells from cord blood blood
15 chr10:6091400-6092200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr10:6091400-6092600 Bivalent Enhancer HepG2 liver
17 chr10:6091400-6093000 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
18 chr10:6091600-6092400 Enhancers Rectal Mucosa Donor 29 rectum
19 chr10:6091600-6092400 Enhancers Thymus Thymus
20 chr10:6091800-6092200 Enhancers Primary hematopoietic stem cells blood
21 chr10:6091800-6092200 Transcr. at gene 5' and 3' Primary T regulatory cells fromperipheralblood blood
22 chr10:6091800-6092400 Enhancers Primary hematopoietic stem cells short term culture blood
23 chr10:6091800-6092400 Enhancers Primary mononuclear cells fromperipheralblood Blood
24 chr10:6091800-6092400 Enhancers Skeletal Muscle Female skeletal muscle
25 chr10:6091800-6092600 Enhancers Breast Myoepithelial Primary Cells Breast
26 chr10:6091800-6092600 Enhancers Esophagus oesophagus
27 chr10:6091800-6092800 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
28 chr10:6091800-6093000 Enhancers Spleen Spleen
29 chr10:6092000-6092400 Enhancers Dnd41 blood
30 chr10:6092000-6092600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
31 chr10:6092000-6092600 Enhancers Left Ventricle heart
32 chr10:6092000-6092600 Enhancers Rectal Mucosa Donor 31 rectum
33 chr10:6092000-6092600 Enhancers Right Ventricle heart
34 chr10:6092000-6092800 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
35 chr10:6092000-6093000 Flanking Active TSS Primary T helper cells fromperipheralblood blood
36 chr10:6092000-6093200 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
37 chr10:6092000-6093400 Flanking Active TSS Primary T cells fromperipheralblood blood
38 chr10:6092000-6093400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr10:6092000-6093400 Enhancers Lung lung
40 chr10:6092000-6094200 Weak transcription Sigmoid Colon Sigmoid Colon

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Last update: Aug 31, 2015