The 2.0 version of rSNPBase

Variant report

Variant rs2247624
Chromosome Location chr10:116307770-116307771
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:116287400-116310600 Weak transcription Brain Angular Gyrus brain
2 chr10:116287400-116310600 Weak transcription Stomach Smooth Muscle stomach
3 chr10:116297600-116308600 Enhancers Primary B cells from peripheral blood blood
4 chr10:116297800-116308600 Enhancers Stomach Mucosa stomach
5 chr10:116298000-116308800 Enhancers Primary Natural Killer cells fromperipheralblood blood
6 chr10:116298200-116307800 Strong transcription Fetal Intestine Small intestine
7 chr10:116298400-116310200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
8 chr10:116298600-116311600 Weak transcription Gastric stomach
9 chr10:116298800-116310400 Weak transcription Small Intestine intestine
10 chr10:116298800-116310600 Weak transcription Colonic Mucosa Colon
11 chr10:116299600-116308200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr10:116299800-116308800 Genic enhancers Left Ventricle heart
13 chr10:116300600-116310600 Weak transcription Brain Hippocampus Middle brain
14 chr10:116301800-116310600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr10:116301800-116310600 Weak transcription Fetal Lung lung
16 chr10:116301800-116310800 Weak transcription HSMM muscle
17 chr10:116304000-116307800 Strong transcription Right Ventricle heart
18 chr10:116304000-116310600 Weak transcription Brain Anterior Caudate brain
19 chr10:116304000-116310600 Weak transcription Brain Cingulate Gyrus brain
20 chr10:116304200-116308800 Enhancers Fetal Thymus thymus
21 chr10:116304200-116310800 Weak transcription Pancreas Pancrea
22 chr10:116304400-116308400 Weak transcription Skeletal Muscle Female skeletal muscle
23 chr10:116304400-116308800 Enhancers Primary T cells fromperipheralblood blood
24 chr10:116304600-116308800 Enhancers Primary T helper naive cells from peripheral blood blood
25 chr10:116304600-116308800 Enhancers Primary T killer naive cells fromperipheralblood blood
26 chr10:116304800-116308200 Enhancers Primary T helper cells PMA-I stimulated --
27 chr10:116304800-116308400 Weak transcription Rectal Mucosa Donor 31 rectum
28 chr10:116304800-116308400 Enhancers Thymus Thymus
29 chr10:116304800-116308800 Enhancers Primary T helper cells fromperipheralblood blood
30 chr10:116305000-116308400 Enhancers Primary T killer memory cells from peripheral blood blood
31 chr10:116305000-116311000 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr10:116305000-116317600 Weak transcription Fetal Muscle Trunk muscle
33 chr10:116305200-116308200 Weak transcription HepG2 liver
34 chr10:116305200-116308400 Weak transcription Skeletal Muscle Male skeletal muscle
35 chr10:116305200-116308800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
36 chr10:116305200-116308800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr10:116305200-116310600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr10:116305200-116310600 Weak transcription Fetal Muscle Leg muscle
39 chr10:116305200-116310800 Weak transcription Esophagus oesophagus
40 chr10:116305200-116310800 Weak transcription Lung lung
41 chr10:116305200-116316000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr10:116305200-116318200 Weak transcription Fetal Intestine Large intestine
43 chr10:116305400-116308200 Weak transcription HMEC breast
44 chr10:116305600-116308200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr10:116306400-116308800 Enhancers Primary T cells from cord blood blood
46 chr10:116306400-116310400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
47 chr10:116306800-116307800 Enhancers HUVEC blood vessel
48 chr10:116307000-116308800 Enhancers Duodenum Mucosa Duodenum
49 chr10:116307000-116309000 Enhancers Fetal Heart heart
50 chr10:116307200-116307800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015