The 2.0 version of rSNPBase

Variant report

Variant rs883511
Chromosome Location chr10:116300218-116300219
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:116287000-116301200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
2 chr10:116287200-116300600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
3 chr10:116287200-116301600 Weak transcription Skeletal Muscle Female skeletal muscle
4 chr10:116287200-116307200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr10:116287400-116300400 Weak transcription Brain Hippocampus Middle brain
6 chr10:116287400-116300600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr10:116287400-116300600 Weak transcription Colon Smooth Muscle Colon
8 chr10:116287400-116300800 Weak transcription Fetal Intestine Large intestine
9 chr10:116287400-116303200 Weak transcription Brain Anterior Caudate brain
10 chr10:116287400-116303800 Weak transcription Rectal Smooth Muscle rectum
11 chr10:116287400-116310600 Weak transcription Brain Angular Gyrus brain
12 chr10:116287400-116310600 Weak transcription Stomach Smooth Muscle stomach
13 chr10:116292400-116303800 Weak transcription Pancreas Pancrea
14 chr10:116294000-116300800 Weak transcription Pancreatic Islets Pancreatic Islet
15 chr10:116296600-116301400 Enhancers Primary T killer naive cells fromperipheralblood blood
16 chr10:116296600-116303600 Enhancers Fetal Thymus thymus
17 chr10:116296800-116303400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
18 chr10:116297000-116300600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr10:116297000-116301000 Enhancers Primary T cells fromperipheralblood blood
20 chr10:116297400-116300400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr10:116297400-116300600 Enhancers Fetal Heart heart
22 chr10:116297400-116300800 Weak transcription HSMM muscle
23 chr10:116297600-116305200 Enhancers Dnd41 blood
24 chr10:116297600-116308600 Enhancers Primary B cells from peripheral blood blood
25 chr10:116297800-116308600 Enhancers Stomach Mucosa stomach
26 chr10:116298000-116301800 Enhancers GM12878-XiMat blood
27 chr10:116298000-116302800 Enhancers Right Atrium heart
28 chr10:116298000-116308800 Enhancers Primary Natural Killer cells fromperipheralblood blood
29 chr10:116298200-116302600 Weak transcription HUVEC blood vessel
30 chr10:116298200-116307800 Strong transcription Fetal Intestine Small intestine
31 chr10:116298400-116303600 Weak transcription Cortex derived primary cultured neurospheres brain
32 chr10:116298400-116307200 Strong transcription Liver Liver
33 chr10:116298400-116307600 Weak transcription Brain Substantia Nigra brain
34 chr10:116298400-116310200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
35 chr10:116298600-116300400 Enhancers HUES6 Cell Line embryonic stem cell
36 chr10:116298600-116300600 Enhancers Primary T helper cells fromperipheralblood blood
37 chr10:116298600-116300800 Weak transcription Sigmoid Colon Sigmoid Colon
38 chr10:116298600-116301000 Enhancers Thymus Thymus
39 chr10:116298600-116303200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
40 chr10:116298600-116303400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
41 chr10:116298600-116303400 Enhancers Primary T helper 17 cells PMA-I stimulated --
42 chr10:116298600-116303400 Enhancers Primary T regulatory cells fromperipheralblood blood
43 chr10:116298600-116304800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr10:116298600-116311600 Weak transcription Gastric stomach
45 chr10:116298800-116300400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr10:116298800-116300400 Weak transcription Adipose Nuclei Adipose
47 chr10:116298800-116300400 Weak transcription Rectal Mucosa Donor 29 rectum
48 chr10:116298800-116300800 Weak transcription HMEC breast
49 chr10:116298800-116302400 Weak transcription Lung lung
50 chr10:116298800-116302400 Weak transcription Spleen Spleen

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Last update: Aug 31, 2015