Variant report

Variant rs2271499
Chromosome Location chr3:238801-238802
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:237000-240400 Active TSS Ovary ovary
2 chr3:237200-240000 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
3 chr3:237200-240200 Active TSS Brain Anterior Caudate brain
4 chr3:237200-241000 Active TSS Brain Angular Gyrus brain
5 chr3:237200-241000 Active TSS Brain Dorsolateral Prefrontal Cortex brain
6 chr3:237200-241000 Active TSS Fetal Brain Male brain
7 chr3:237400-241200 Active TSS Brain Inferior Temporal Lobe brain
8 chr3:237600-240000 Bivalent/Poised TSS Brain Germinal Matrix brain
9 chr3:237600-240200 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
10 chr3:237600-241200 Bivalent/Poised TSS Brain Cingulate Gyrus brain
11 chr3:237800-240200 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr3:237800-240200 Bivalent/Poised TSS Duodenum Mucosa Duodenum
13 chr3:237800-240400 Bivalent/Poised TSS H1 Cell Line embryonic stem cell
14 chr3:237800-240400 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
15 chr3:237800-240400 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
16 chr3:237800-240400 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
17 chr3:237800-240400 Flanking Active TSS Adipose Nuclei Adipose
18 chr3:237800-240400 Active TSS Pancreatic Islets Pancreatic Islet
19 chr3:237800-240400 Active TSS Rectal Mucosa Donor 29 rectum
20 chr3:237800-240400 Active TSS Right Atrium heart
21 chr3:237800-240600 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
22 chr3:238000-239200 Bivalent/Poised TSS Fetal Brain Female brain
23 chr3:238000-239800 Bivalent/Poised TSS Fetal Intestine Small intestine
24 chr3:238000-240000 Active TSS Rectal Mucosa Donor 31 rectum
25 chr3:238000-240200 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr3:238000-240200 Active TSS Rectal Smooth Muscle rectum
27 chr3:238000-240400 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
28 chr3:238000-240400 Bivalent/Poised TSS H9 Derived Neuron Cultured Cells ES cell derived
29 chr3:238000-240400 Bivalent/Poised TSS IMR90 fetal lung fibroblasts Cell Line lung
30 chr3:238000-240400 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
31 chr3:238000-240400 Active TSS Breast Myoepithelial Primary Cells Breast
32 chr3:238000-240400 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr3:238200-239200 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
34 chr3:238200-239400 Flanking Active TSS Liver Liver
35 chr3:238200-239400 Flanking Bivalent TSS/Enh Right Ventricle heart
36 chr3:238200-239800 Bivalent/Poised TSS Primary Natural Killer cells fromperipheralblood blood
37 chr3:238200-239800 Bivalent/Poised TSS Fetal Thymus thymus
38 chr3:238200-239800 Active TSS Spleen Spleen
39 chr3:238200-240000 Active TSS Cortex derived primary cultured neurospheres brain
40 chr3:238200-240000 Active TSS Aorta Aorta
41 chr3:238200-240000 Bivalent/Poised TSS Psoas Muscle Psoas
42 chr3:238200-240000 Bivalent/Poised TSS Thymus Thymus
43 chr3:238200-240200 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr3:238200-240200 Bivalent/Poised TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr3:238200-240200 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
46 chr3:238200-240200 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
47 chr3:238200-240200 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr3:238200-240200 Bivalent/Poised TSS Left Ventricle heart
49 chr3:238200-240200 Active TSS Sigmoid Colon Sigmoid Colon
50 chr3:238200-240200 Bivalent/Poised TSS NHEK skin

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