Variant report

Variant	rs229669
Chromosome Location	chr14:65284391-65284392
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:65284109..65285780-chr14:65289982..65291896,2	K562	blood:
2	chr14:65283473..65284423-chr14:65584826..65585837,6	MCF-7	breast:
3	chr14:65277232..65280033-chr14:65282761..65285500,2	K562	blood:
4	chr14:65283734..65284423-chr14:65584826..65585837,5	MCF-7	breast:
5	chr14:65282387..65284619-chr14:65285854..65288049,2	MCF-7	breast:

rs_ID	r²[population]
rs12433757	0.87[CEU][hapmap];0.88[EUR][1000 genomes]
rs12435626	0.85[CEU][hapmap];0.88[EUR][1000 genomes]
rs12436545	0.88[CEU][hapmap];0.88[EUR][1000 genomes]
rs17102190	0.88[CEU][hapmap]
rs17180385	1.00[CEU][hapmap]
rs17180532	0.85[CEU][hapmap]
rs1957416	1.00[CEU][hapmap]
rs2273475	0.88[CEU][hapmap]
rs2285003	0.85[CEU][hapmap]
rs230698	0.85[CEU][hapmap]
rs230700	0.85[CEU][hapmap]
rs230701	0.88[CEU][hapmap]
rs230715	1.00[CEU][hapmap]
rs230718	1.00[CEU][hapmap]
rs230723	1.00[CEU][hapmap]
rs3819918	0.85[CEU][hapmap];0.98[EUR][1000 genomes]
rs6573571	0.85[CEU][hapmap]
rs7144515	1.00[CEU][hapmap]
rs72625633	0.96[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72625634	0.88[EUR][1000 genomes]
rs72625635	0.88[EUR][1000 genomes]

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:65262000-65289800	Weak transcription	Brain Inferior Temporal Lobe	brain
2	chr14:65268400-65290200	Weak transcription	Brain Germinal Matrix	brain
3	chr14:65271400-65289800	Weak transcription	Brain Anterior Caudate	brain
4	chr14:65273800-65287200	Weak transcription	K562	blood
5	chr14:65274600-65284600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
6	chr14:65275800-65290000	Weak transcription	Psoas Muscle	Psoas
7	chr14:65279400-65284400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr14:65279400-65284400	Weak transcription	Aorta	Aorta
9	chr14:65279400-65284600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr14:65279400-65287000	Weak transcription	H9 Cell Line	embryonic stem cell
11	chr14:65281800-65288400	Genic enhancers	Skeletal Muscle Female	skeletal muscle
12	chr14:65283400-65285000	Strong transcription	Skeletal Muscle Male	skeletal muscle
13	chr14:65283600-65289400	Weak transcription	Right Ventricle	heart
14	chr14:65283600-65289600	Weak transcription	Fetal Heart	heart
15	chr14:65284000-65284400	Weak transcription	Left Ventricle	heart
16	chr14:65284000-65285200	Enhancers	HSMMtube	muscle
17	chr14:65284200-65284600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
18	chr14:65284200-65284800	Enhancers	Muscle Satellite Cultured Cells	--
19	chr14:65284200-65284800	Enhancers	HSMM	muscle
20	chr14:65284200-65285400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
21	chr14:65284200-65285800	Bivalent Enhancer	Fetal Muscle Trunk	muscle
22	chr14:65284200-65289200	Genic enhancers	Fetal Muscle Leg	muscle

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