Variant report

Variant rs2296743
Chromosome Location chr6:33740025-33740026
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:33732600-33742400 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr6:33736200-33740600 Enhancers ES-I3 Cell Line embryonic stem cell
3 chr6:33736600-33740200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
4 chr6:33736600-33740200 Enhancers HUVEC blood vessel
5 chr6:33736800-33740200 Weak transcription Primary T helper naive cells from peripheral blood blood
6 chr6:33736800-33741000 Weak transcription Primary T killer naive cells fromperipheralblood blood
7 chr6:33736800-33743400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr6:33737400-33740200 Enhancers NH-A brain
9 chr6:33737600-33740200 Enhancers iPS-18 Cell Line embryonic stem cell
10 chr6:33737600-33740600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr6:33737800-33740200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
12 chr6:33737800-33740200 Enhancers HUES48 Cell Line embryonic stem cell
13 chr6:33737800-33740200 Enhancers Psoas Muscle Psoas
14 chr6:33737800-33740400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr6:33737800-33742600 Weak transcription Hela-S3 cervix
16 chr6:33738000-33740200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
17 chr6:33738000-33741000 Enhancers NHDF-Ad bronchial
18 chr6:33738200-33740200 Enhancers Brain Angular Gyrus brain
19 chr6:33738200-33740400 Enhancers Stomach Mucosa stomach
20 chr6:33738400-33740200 Weak transcription Primary B cells from cord blood blood
21 chr6:33738600-33740600 Genic enhancers Fetal Intestine Small intestine
22 chr6:33738600-33741400 Genic enhancers Fetal Stomach stomach
23 chr6:33738600-33753200 Strong transcription Thymus Thymus
24 chr6:33738800-33740200 Enhancers HMEC breast
25 chr6:33738800-33740400 Weak transcription Small Intestine intestine
26 chr6:33738800-33740600 Genic enhancers A549 lung
27 chr6:33738800-33741800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr6:33738800-33741800 Genic enhancers Fetal Muscle Trunk muscle
29 chr6:33739000-33740200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
30 chr6:33739000-33740200 Enhancers Muscle Satellite Cultured Cells --
31 chr6:33739000-33740200 Genic enhancers Brain Germinal Matrix brain
32 chr6:33739000-33740400 Weak transcription Aorta Aorta
33 chr6:33739000-33740600 Weak transcription Fetal Kidney kidney
34 chr6:33739000-33741400 Enhancers Fetal Brain Male brain
35 chr6:33739000-33741400 Enhancers HSMM muscle
36 chr6:33739000-33741600 Enhancers HSMMtube muscle
37 chr6:33739000-33746000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
38 chr6:33739200-33740200 Weak transcription H9 Cell Line embryonic stem cell
39 chr6:33739200-33740200 Enhancers Pancreas Pancrea
40 chr6:33739200-33740200 Genic enhancers Right Atrium heart
41 chr6:33739200-33740400 Enhancers K562 blood
42 chr6:33739600-33740200 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
43 chr6:33739600-33740200 Enhancers Fetal Heart heart
44 chr6:33739600-33740200 Genic enhancers Lung lung
45 chr6:33739600-33741400 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
46 chr6:33739600-33742000 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr6:33739600-33752600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
48 chr6:33739600-33754000 Strong transcription Primary neutrophils fromperipheralblood blood
49 chr6:33739800-33740200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
50 chr6:33739800-33740200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood

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