The 2.0 version of rSNPBase

Variant report

Variant rs2338200
Chromosome Location chr1:151845569-151845570
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:151819200-151847600 Weak transcription Thymus Thymus
2 chr1:151821600-151845600 Weak transcription Primary T regulatory cells fromperipheralblood blood
3 chr1:151826400-151846200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
4 chr1:151831000-151881400 Weak transcription Ovary ovary
5 chr1:151832000-151859600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr1:151832800-151846000 Weak transcription Spleen Spleen
7 chr1:151834000-151849600 Weak transcription Esophagus oesophagus
8 chr1:151835600-151847600 Weak transcription HSMMtube muscle
9 chr1:151837200-151845600 Weak transcription Lung lung
10 chr1:151837400-151846000 Weak transcription Left Ventricle heart
11 chr1:151837800-151846200 Weak transcription Fetal Thymus thymus
12 chr1:151839600-151845800 Weak transcription Primary T cells fromperipheralblood blood
13 chr1:151840200-151846000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr1:151840400-151846000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr1:151840600-151846000 Weak transcription Adipose Nuclei Adipose
16 chr1:151840600-151864600 Weak transcription NH-A brain
17 chr1:151840800-151846000 Weak transcription Primary T helper naive cells fromperipheralblood blood
18 chr1:151840800-151847600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
19 chr1:151840800-151857800 Weak transcription K562 blood
20 chr1:151841000-151845800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr1:151841000-151846000 Weak transcription Monocytes-CD14+_RO01746 blood
22 chr1:151841000-151846200 Weak transcription Fetal Lung lung
23 chr1:151841200-151845600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
24 chr1:151841200-151846000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr1:151841200-151846200 Weak transcription Rectal Mucosa Donor 29 rectum
26 chr1:151841200-151847600 Weak transcription Primary T killer memory cells from peripheral blood blood
27 chr1:151841200-151859200 Weak transcription Muscle Satellite Cultured Cells --
28 chr1:151841200-151880800 Weak transcription NHLF lung
29 chr1:151841400-151846000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr1:151841400-151860000 Weak transcription Hela-S3 cervix
31 chr1:151841400-151860200 Weak transcription Osteobl bone
32 chr1:151841600-151864000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr1:151842600-151846000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
34 chr1:151843000-151846000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr1:151843000-151846000 Weak transcription Primary T helper naive cells from peripheral blood blood
36 chr1:151843000-151846000 Weak transcription Skeletal Muscle Female skeletal muscle
37 chr1:151843200-151846000 Weak transcription Skeletal Muscle Male skeletal muscle
38 chr1:151843400-151845800 Weak transcription Primary T helper cells PMA-I stimulated --
39 chr1:151843400-151846400 Weak transcription Primary B cells from peripheral blood blood
40 chr1:151843400-151859600 Weak transcription Fetal Muscle Leg muscle
41 chr1:151843800-151845800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
42 chr1:151843800-151846200 Weak transcription Primary T cells from cord blood blood
43 chr1:151844000-151845800 Weak transcription Duodenum Smooth Muscle Duodenum
44 chr1:151844000-151860000 Weak transcription HSMM muscle
45 chr1:151844000-151864600 Weak transcription Rectal Mucosa Donor 31 rectum
46 chr1:151844200-151845800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
47 chr1:151844200-151846000 Weak transcription Stomach Smooth Muscle stomach
48 chr1:151844200-151846000 Weak transcription HUVEC blood vessel
49 chr1:151844200-151846200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr1:151844200-151859600 Weak transcription Brain Angular Gyrus brain

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Last update: Aug 31, 2015