Variant report

Variant	rs1552607
Chromosome Location	chr1:151963398-151963399
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MAX	chr1:151960617-151963779	A549	lung:	n/a	chr1:151961086-151961095 chr1:151961087-151961096
2	TBP	chr1:151963357-151963620	Hela-S3	cervix:	n/a	n/a
3	JUND	chr1:151963216-151963611	A549	lung:	n/a	n/a
4	MAFK	chr1:151963321-151963808	IMR90	lung:	n/a	n/a
5	POLR2A	chr1:151963065-151963628	ECC-1	luminal epithelium:	n/a	n/a
6	FOXM1	chr1:151960397-151963953	MCF-7	breast:	n/a	n/a
7	FOXA1	chr1:151963348-151963654	HepG2	liver:	n/a	n/a
8	RCOR1	chr1:151963296-151963583	Hela-S3	cervix:	n/a	n/a
9	POLR2A	chr1:151960317-151966352	A549	lung:	n/a	n/a
10	GATA3	chr1:151963170-151963637	T-47D	breast:	n/a	n/a
11	CEBPB	chr1:151963296-151963639	Hela-S3	cervix:	n/a	n/a
12	TAF1	chr1:151963393-151963590	SK-N-SH	brain:	n/a	n/a
13	FOXA1	chr1:151963263-151963638	HepG2	liver:	n/a	n/a
14	ETS1	chr1:151963120-151963963	A549	lung:	n/a	n/a
15	SIN3AK20	chr1:151962868-151963692	A549	lung:	n/a	n/a
16	KAP1	chr1:151962796-151963722	HEK293	kidney:	n/a	n/a
17	JUND	chr1:151960346-151963703	SK-N-SH	brain:	n/a	chr1:151961085-151961092 chr1:151961085-151961097 chr1:151962152-151962162 chr1:151961086-151961096 chr1:151962152-151962162 chr1:151961087-151961096 chr1:151961088-151961095 chr1:151962152-151962162 chr1:151961087-151961095 chr1:151962152-151962162 chr1:151960908-151960919 chr1:151961085-151961096
18	STAT3	chr1:151963265-151963748	Hela-S3	cervix:	n/a	chr1:151963268-151963279
19	MAX	chr1:151963251-151963610	Hela-S3	cervix:	n/a	n/a
20	POLR2A	chr1:151960212-151963985	Hela-S3	cervix:	n/a	n/a
21	POLR2A	chr1:151960197-151968028	U87	brain:	n/a	n/a
22	POLR2A	chr1:151963122-151967069	PANC-1	pancreas:	n/a	n/a
23	EP300	chr1:151963198-151963881	A549	lung:	n/a	chr1:151963270-151963284 chr1:151963458-151963468
24	ELF1	chr1:151960617-151963862	MCF-7	breast:	n/a	n/a
25	EP300	chr1:151962623-151963832	A549	lung:	n/a	chr1:151963270-151963284 chr1:151963458-151963468
26	GATA3	chr1:151960388-151963881	MCF-7	breast:	n/a	chr1:151961857-151961864 chr1:151962190-151962198 chr1:151961085-151961094 chr1:151960706-151960715 chr1:151960570-151960580 chr1:151960706-151960715 chr1:151960697-151960714 chr1:151960703-151960719
27	POLR2A	chr1:151963185-151963711	SK-N-SH	brain:	n/a	n/a
28	RAD21	chr1:151963379-151963601	SK-N-SH_RA	brain:	n/a	n/a
29	SMC3	chr1:151963280-151963620	Hela-S3	cervix:	n/a	n/a
30	FOXA1	chr1:151963229-151963665	T-47D	breast:	n/a	n/a
31	HDAC2	chr1:151962501-151963791	MCF-7	breast:	n/a	chr1:151963458-151963467
32	SP1	chr1:151963143-151963745	A549	lung:	n/a	n/a
33	HDAC2	chr1:151960613-151964050	MCF-7	breast:	n/a	chr1:151961539-151961553 chr1:151963458-151963467
34	TCF7L2	chr1:151963350-151963594	Hela-S3	cervix:	n/a	n/a
35	EP300	chr1:151963293-151963587	SK-N-SH_RA	brain:	n/a	chr1:151963458-151963468
36	MXI1	chr1:151962964-151967005	IMR90	lung:	n/a	n/a
37	FOXA2	chr1:151963295-151963710	A549	lung:	n/a	n/a
38	REST	chr1:151962912-151963601	PFSK-1	brain:	n/a	chr1:151963188-151963197 chr1:151963186-151963199 chr1:151963189-151963203
39	SP1	chr1:151960569-151963994	A549	lung:	n/a	chr1:151961799-151961808 chr1:151961214-151961228 chr1:151962658-151962665 chr1:151961806-151961820
40	POLR2A	chr1:151963083-151963635	PFSK-1	brain:	n/a	n/a
41	REST	chr1:151962997-151963416	ECC-1	luminal epithelium:	n/a	chr1:151963188-151963197 chr1:151963186-151963199 chr1:151963189-151963203
42	TEAD4	chr1:151962444-151963645	A549	lung:	n/a	chr1:151962717-151962726
43	FOXA1	chr1:151963276-151963631	T-47D	breast:	n/a	n/a
44	ZNF263	chr1:151960818-151963823	HEK293-T-REx	kidney:	n/a	chr1:151961806-151961815
45	EP300	chr1:151960499-151963762	ECC-1	luminal epithelium:	n/a	chr1:151961087-151961096 chr1:151961086-151961095 chr1:151963270-151963284 chr1:151963458-151963468
46	SIN3AK20	chr1:151960514-151967216	MCF-7	breast:	n/a	n/a
47	NFIC	chr1:151963063-151963815	ECC-1	luminal epithelium:	n/a	chr1:151963590-151963618
48	POLR2A	chr1:151960188-151967254	PANC-1	pancreas:	n/a	n/a
49	FOXA2	chr1:151963227-151963628	A549	lung:	n/a	n/a
50	GTF2F1	chr1:151963210-151963580	Hela-S3	cervix:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr1:151803084..151806304-chr1:151962981..151966430,4	MCF-7	breast:
2	chr1:151920501..151922320-chr1:151962400..151965015,2	MCF-7	breast:
3	chr1:151962033..151964445-chr15:74939477..74941082,2	MCF-7	breast:
4	chr1:151961745..151973594-chr1:152015769..152025096,31	MCF-7	breast:
5	chr1:151960436..151963988-chr1:151965129..151968097,4	K562	blood:
6	chr1:151512000..151514294-chr1:151960120..151963735,4	MCF-7	breast:
7	chr1:151879131..151885542-chr1:151961269..151968730,13	MCF-7	breast:
8	chr1:151957047..151958820-chr1:151961380..151963425,2	K562	blood:
9	chr1:151811113..151814780-chr1:151962857..151966577,5	MCF-7	breast:
10	chr1:151958312..151964069-chr1:151964449..151968550,6	K562	blood:
11	chr1:151958520..151979218-chr1:151992734..152014750,97	MCF-7	breast:
12	chr1:151880209..151887387-chr1:151961986..151968084,15	MCF-7	breast:
13	chr1:151484691..151486621-chr1:151962085..151964758,2	MCF-7	breast:
14	chr1:151903606..151908213-chr1:151959560..151963672,4	MCF-7	breast:
15	chr1:151864865..151867501-chr1:151960955..151964248,3	MCF-7	breast:
16	chr1:151880619..151883226-chr1:151961289..151965303,4	K562	blood:

Variant related genes	Relation type
NBPF18P	TF binding region
ENSG00000143367	Chromatin interaction
ENSG00000143365	Chromatin interaction
ENSG00000232536	Chromatin interaction
ENSG00000229021	Chromatin interaction
ENSG00000225556	Chromatin interaction
ENSG00000163191	Chromatin interaction
ENSG00000201134	Chromatin interaction
ENSG00000197747	Chromatin interaction
ENSG00000234614	Chromatin interaction
ENSG00000159445	Chromatin interaction

Extended variants
information (count: 134 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:129)

rs_ID	r²[population]
rs1003107	1.00[CHB][hapmap];0.87[YRI][hapmap];0.82[AFR][1000 genomes]
rs10158030	1.00[CHB][hapmap];0.85[YRI][hapmap]
rs1038746	1.00[CHB][hapmap];0.86[YRI][hapmap];1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1038748	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1048910	0.82[AFR][1000 genomes]
rs10788813	1.00[CHB][hapmap]
rs10788814	0.82[AFR][1000 genomes]
rs10788816	1.00[CHB][hapmap];0.87[YRI][hapmap];0.82[AFR][1000 genomes]
rs10888449	0.87[AFR][1000 genomes]
rs10888453	1.00[CHB][hapmap];0.87[YRI][hapmap];0.92[AFR][1000 genomes]
rs11204911	1.00[CHB][hapmap]
rs11204912	1.00[CHB][hapmap]
rs11204923	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11578030	1.00[CHB][hapmap]
rs12723616	1.00[CHB][hapmap]
rs1387834	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1387835	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1473493	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1473494	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1473495	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1490187	1.00[CHB][hapmap]
rs1490188	0.81[ASN][1000 genomes]
rs1490190	0.87[AFR][1000 genomes]
rs1490191	1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs1496037	1.00[CHB][hapmap]
rs1532132	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1552605	1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1552606	1.00[CHB][hapmap];0.85[YRI][hapmap];0.92[AFR][1000 genomes]
rs1602245	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1602246	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1602248	1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17583707	1.00[CHB][hapmap];0.91[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs1826170	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1826171	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1826172	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1844542	0.87[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs1873310	1.00[CHB][hapmap]
rs1873311	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1873312	1.00[CHB][hapmap];0.85[YRI][hapmap];0.87[AFR][1000 genomes]
rs1967084	0.84[ASN][1000 genomes]
rs1967085	1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs1979638	0.84[ASN][1000 genomes]
rs2087550	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs2130526	0.87[AFR][1000 genomes]
rs2338018	1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2338203	0.87[YRI][hapmap];0.87[AFR][1000 genomes]
rs2338204	0.87[YRI][hapmap];0.92[AFR][1000 genomes]
rs2338210	0.82[AMR][1000 genomes]
rs2932563	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2932564	0.95[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2932567	1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs2932572	0.81[ASN][1000 genomes]
rs2932573	0.81[ASN][1000 genomes]
rs2932578	0.83[AFR][1000 genomes]
rs2932584	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2932585	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2932588	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2932591	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2932592	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2932595	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2932596	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2932597	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2999509	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs2999511	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2999514	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2999515	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2999518	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2999519	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs2999520	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2999522	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2999523	0.91[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2999524	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2999525	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2999527	1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2999529	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2999530	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2999535	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2999536	1.00[CHB][hapmap]
rs2999537	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs2999538	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs2999551	1.00[CHB][hapmap]
rs2999552	1.00[CHB][hapmap]
rs2999555	1.00[CHB][hapmap]
rs2999558	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs3001979	1.00[CHB][hapmap]
rs3007672	1.00[CHB][hapmap]
rs3007676	1.00[CHB][hapmap]
rs3007679	1.00[CHB][hapmap]
rs3007682	0.83[AFR][1000 genomes]
rs3007690	1.00[CEU][hapmap];1.00[CHB][hapmap]
rs3007692	0.91[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs3007693	0.80[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs3007699	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3007700	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3007701	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3007704	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs3007714	0.84[ASN][1000 genomes]
rs3122300	1.00[CHB][hapmap]
rs3122301	1.00[CHB][hapmap]
rs3134814	1.00[CHB][hapmap]
rs34370890	0.91[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs3748805	0.87[AFR][1000 genomes]
rs3762427	0.82[AFR][1000 genomes]
rs4845385	1.00[CHB][hapmap];0.85[YRI][hapmap]
rs4845388	1.00[CHB][hapmap];0.85[YRI][hapmap];0.82[AFR][1000 genomes]
rs4845393	1.00[CHB][hapmap];0.87[YRI][hapmap];0.82[AFR][1000 genomes]
rs4845660	1.00[CHB][hapmap]
rs4845664	1.00[CHB][hapmap]
rs4845699	0.87[AFR][1000 genomes]
rs61113720	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes]
rs6587626	1.00[CHB][hapmap]
rs6587628	1.00[CHB][hapmap]
rs6587629	1.00[CHB][hapmap];0.85[YRI][hapmap];0.82[AFR][1000 genomes]
rs6587630	1.00[CHB][hapmap]
rs6587641	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs6659029	1.00[CHB][hapmap]
rs6662463	0.82[AFR][1000 genomes]
rs6685291	1.00[CHB][hapmap]
rs6690443	0.82[AFR][1000 genomes]
rs6691350	1.00[CHB][hapmap];0.85[YRI][hapmap];0.87[AFR][1000 genomes]
rs6704157	0.89[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs7529451	1.00[CHB][hapmap]
rs7532721	1.00[CHB][hapmap]
rs902314	1.00[CHB][hapmap]
rs902315	1.00[CHB][hapmap]
rs959945	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs971888	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9943225	1.00[CHB][hapmap];0.85[YRI][hapmap];0.82[AFR][1000 genomes]
rs994974	0.84[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1007097	chr1:151832796-152227977	Strong transcription Genic enhancers Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	196 gene(s)	inside rSNPs	diseases
2	nsv1012327	chr1:151835544-152200890	Enhancers Bivalent/Poised TSS Flanking Active TSS Strong transcription Active TSS Genic enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	196 gene(s)	inside rSNPs	diseases
3	nsv535159	chr1:151835544-152200890	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	196 gene(s)	inside rSNPs	diseases
4	nsv872441	chr1:151850072-152034430	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	191 gene(s)	inside rSNPs	diseases
5	nsv2855	chr1:151936470-151966381	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	85 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:103 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:151958600-151963800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
2	chr1:151959200-151964200	Enhancers	Placenta	Placenta
3	chr1:151959200-151964200	Weak transcription	Dnd41	blood
4	chr1:151960400-151963600	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
5	chr1:151960400-151964200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
6	chr1:151960400-151964200	Enhancers	Left Ventricle	heart
7	chr1:151960400-151964800	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
8	chr1:151960400-151964800	Enhancers	Primary T helper cells PMA-I stimulated	--
9	chr1:151960400-151964800	Flanking Active TSS	Muscle Satellite Cultured Cells	--
10	chr1:151960400-151965000	Enhancers	Small Intestine	intestine
11	chr1:151960400-151965600	Transcr. at gene 5' and 3'	NHEK	skin
12	chr1:151960400-151965800	Transcr. at gene 5' and 3'	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr1:151960400-151965800	Transcr. at gene 5' and 3'	A549	lung
14	chr1:151960600-151963600	Enhancers	HUES64 Cell Line	embryonic stem cell
15	chr1:151960600-151963600	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
16	chr1:151960600-151964200	Enhancers	Skeletal Muscle Female	skeletal muscle
17	chr1:151960600-151964400	Weak transcription	Primary B cells from peripheral blood	blood
18	chr1:151960600-151965000	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
19	chr1:151960600-151965400	Flanking Active TSS	Duodenum Mucosa	Duodenum
20	chr1:151960600-151965600	Flanking Active TSS	NH-A	brain
21	chr1:151960800-151964000	Enhancers	HUES48 Cell Line	embryonic stem cell
22	chr1:151960800-151964200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
23	chr1:151960800-151964200	Enhancers	Primary T helper naive cells from peripheral blood	blood
24	chr1:151960800-151965000	Flanking Active TSS	HUVEC	blood vessel
25	chr1:151960800-151966000	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
26	chr1:151961000-151963400	Enhancers	Ovary	ovary
27	chr1:151961000-151963400	Enhancers	Sigmoid Colon	Sigmoid Colon
28	chr1:151961000-151963600	Genic enhancers	Primary T regulatory cells fromperipheralblood	blood
29	chr1:151961000-151963600	Enhancers	Gastric	stomach
30	chr1:151961000-151964200	Enhancers	iPS-15b Cell Line	embryonic stem cell
31	chr1:151961000-151964200	Enhancers	Fetal Muscle Leg	muscle
32	chr1:151961000-151964800	Enhancers	Primary T helper naive cells fromperipheralblood	blood
33	chr1:151961000-151965000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
34	chr1:151961200-151963400	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
35	chr1:151961200-151963600	Enhancers	Spleen	Spleen
36	chr1:151961200-151964200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
37	chr1:151961200-151964400	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
38	chr1:151961200-151964800	Enhancers	Primary T helper cells fromperipheralblood	blood
39	chr1:151961200-151965400	Flanking Active TSS	Adipose Nuclei	Adipose
40	chr1:151961400-151964400	Flanking Active TSS	Stomach Smooth Muscle	stomach
41	chr1:151961400-151964600	Transcr. at gene 5' and 3'	Fetal Intestine Small	intestine
42	chr1:151961600-151963400	Genic enhancers	ES-I3 Cell Line	embryonic stem cell
43	chr1:151961600-151963600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
44	chr1:151961600-151963600	Genic enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
45	chr1:151961600-151963600	Bivalent Enhancer	Fetal Heart	heart
46	chr1:151961600-151964200	Enhancers	Stomach Mucosa	stomach
47	chr1:151961600-151964400	Enhancers	Brain Hippocampus Middle	brain
48	chr1:151961600-151964600	Enhancers	Liver	Liver
49	chr1:151961600-151964600	Enhancers	Brain Anterior Caudate	brain
50	chr1:151961800-151963600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain

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