The 2.0 version of rSNPBase

Variant report

Variant rs2999514
Chromosome Location chr1:151947568-151947569
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:151934600-151953400 Weak transcription Psoas Muscle Psoas
2 chr1:151939600-151950800 Enhancers Fetal Intestine Small intestine
3 chr1:151941000-151953200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
4 chr1:151941000-151953200 Weak transcription Primary T killer memory cells from peripheral blood blood
5 chr1:151941000-151953400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
6 chr1:151941000-151953400 Weak transcription Primary T helper cells PMA-I stimulated --
7 chr1:151941000-151954800 Weak transcription Primary T helper naive cells fromperipheralblood blood
8 chr1:151941200-151952800 Weak transcription Primary T helper cells fromperipheralblood blood
9 chr1:151941200-151952800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
10 chr1:151941200-151953000 Weak transcription Primary T cells fromperipheralblood blood
11 chr1:151941200-151955200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
12 chr1:151941600-151961200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
13 chr1:151941800-151949400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr1:151941800-151953000 Weak transcription Lung lung
15 chr1:151941800-151953600 Weak transcription Gastric stomach
16 chr1:151941800-151956200 Weak transcription Pancreas Pancrea
17 chr1:151942400-151951800 Enhancers Fetal Intestine Large intestine
18 chr1:151943000-151949400 Weak transcription Esophagus oesophagus
19 chr1:151943000-151953000 Weak transcription Spleen Spleen
20 chr1:151943400-151949000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr1:151945400-151947800 Enhancers HepG2 liver
22 chr1:151945400-151949200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr1:151945400-151952400 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr1:151945400-151953400 Weak transcription H9 Cell Line embryonic stem cell
25 chr1:151945600-151950600 Enhancers Duodenum Mucosa Duodenum
26 chr1:151945600-151950800 Enhancers Rectal Mucosa Donor 31 rectum
27 chr1:151945600-151953000 Weak transcription Stomach Smooth Muscle stomach
28 chr1:151945600-151953600 Weak transcription Fetal Adrenal Gland Adrenal Gland
29 chr1:151945600-151953800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
30 chr1:151945600-151953800 Weak transcription Rectal Smooth Muscle rectum
31 chr1:151945800-151947800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr1:151946000-151949000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr1:151946000-151949000 Weak transcription NH-A brain
34 chr1:151946000-151949200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
35 chr1:151946000-151949200 Weak transcription HUVEC blood vessel
36 chr1:151946000-151949400 Weak transcription Small Intestine intestine
37 chr1:151946000-151949400 Weak transcription HSMM muscle
38 chr1:151946000-151951200 Enhancers Hela-S3 cervix
39 chr1:151946000-151952600 Weak transcription Sigmoid Colon Sigmoid Colon
40 chr1:151946000-151954800 Weak transcription HUES48 Cell Line embryonic stem cell
41 chr1:151946000-151954800 Weak transcription iPS-20b Cell Line embryonic stem cell
42 chr1:151946200-151948600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr1:151946200-151948800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr1:151946200-151949000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr1:151946200-151949000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr1:151946200-151949000 Weak transcription Muscle Satellite Cultured Cells --
47 chr1:151946200-151949000 Weak transcription Placenta Placenta
48 chr1:151946200-151949400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr1:151946200-151949400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
50 chr1:151946200-151952800 Weak transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015