The 2.0 version of rSNPBase

Variant report

Variant rs1826172
Chromosome Location chr1:151944510-151944511
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:151933600-151945000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
2 chr1:151934600-151953400 Weak transcription Psoas Muscle Psoas
3 chr1:151936000-151945000 Weak transcription HSMMtube muscle
4 chr1:151937200-151945000 Weak transcription Skeletal Muscle Female skeletal muscle
5 chr1:151938400-151945000 Enhancers HMEC breast
6 chr1:151938400-151946200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr1:151939600-151950800 Enhancers Fetal Intestine Small intestine
8 chr1:151940400-151945000 Enhancers Hela-S3 cervix
9 chr1:151940800-151945200 Weak transcription Fetal Adrenal Gland Adrenal Gland
10 chr1:151941000-151944800 Weak transcription Rectal Smooth Muscle rectum
11 chr1:151941000-151945000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr1:151941000-151945000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr1:151941000-151946200 Weak transcription Colonic Mucosa Colon
14 chr1:151941000-151953200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
15 chr1:151941000-151953200 Weak transcription Primary T killer memory cells from peripheral blood blood
16 chr1:151941000-151953400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
17 chr1:151941000-151953400 Weak transcription Primary T helper cells PMA-I stimulated --
18 chr1:151941000-151954800 Weak transcription Primary T helper naive cells fromperipheralblood blood
19 chr1:151941200-151945200 Weak transcription Placenta Placenta
20 chr1:151941200-151952800 Weak transcription Primary T helper cells fromperipheralblood blood
21 chr1:151941200-151952800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
22 chr1:151941200-151953000 Weak transcription Primary T cells fromperipheralblood blood
23 chr1:151941200-151955200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
24 chr1:151941400-151945000 Weak transcription iPS-20b Cell Line embryonic stem cell
25 chr1:151941400-151945000 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr1:151941400-151945200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr1:151941400-151947200 Weak transcription Liver Liver
28 chr1:151941600-151945200 Weak transcription H1 Cell Line embryonic stem cell
29 chr1:151941600-151961200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
30 chr1:151941800-151945000 Weak transcription H9 Cell Line embryonic stem cell
31 chr1:151941800-151945000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr1:151941800-151945000 Weak transcription NH-A brain
33 chr1:151941800-151945200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
34 chr1:151941800-151945400 Weak transcription Right Atrium heart
35 chr1:151941800-151949400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
36 chr1:151941800-151953000 Weak transcription Lung lung
37 chr1:151941800-151953600 Weak transcription Gastric stomach
38 chr1:151941800-151956200 Weak transcription Pancreas Pancrea
39 chr1:151942000-151945000 Weak transcription Primary hematopoietic stem cells short term culture blood
40 chr1:151942000-151945200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr1:151942000-151945400 Weak transcription HepG2 liver
42 chr1:151942200-151944800 Weak transcription Rectal Mucosa Donor 29 rectum
43 chr1:151942200-151945000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
44 chr1:151942400-151944600 Weak transcription HUVEC blood vessel
45 chr1:151942400-151951800 Enhancers Fetal Intestine Large intestine
46 chr1:151942600-151945800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
47 chr1:151942600-151946800 Enhancers HUES64 Cell Line embryonic stem cell
48 chr1:151942800-151944800 Weak transcription Monocytes-CD14+_RO01746 blood
49 chr1:151943000-151945000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr1:151943000-151945000 Weak transcription Primary monocytes fromperipheralblood blood

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Last update: Aug 31, 2015