Variant report

Variant	rs2355736
Chromosome Location	chr14:63266931-63266932
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs12588779	0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12590357	0.91[ASN][1000 genomes]
rs17100387	0.99[ASN][1000 genomes]
rs1844508	0.97[ASN][1000 genomes]
rs67434559	0.81[EUR][1000 genomes]
rs7147349	0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs72625622	0.81[EUR][1000 genomes]
rs72625624	0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72625625	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs72625627	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72625628	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72625629	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs8020611	0.81[EUR][1000 genomes]
rs915061	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv902015	chr14:63261862-63356253	Enhancers Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
2	esv3367756	chr14:63265649-63267697	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:63255600-63274400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr14:63266600-63267600	Enhancers	Cortex derived primary cultured neurospheres	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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