Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs12588779	1.00[CHB][hapmap];0.85[JPT][hapmap];0.83[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs12590351	0.80[CHB][hapmap];0.80[JPT][hapmap]
rs12590357	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17100282	0.80[JPT][hapmap]
rs17100325	1.00[CHB][hapmap];0.85[JPT][hapmap]
rs1844508	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs2355736	0.99[ASN][1000 genomes]
rs41490444	0.93[CHB][hapmap];1.00[JPT][hapmap]
rs58702938	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7147349	1.00[CHB][hapmap];0.85[JPT][hapmap];0.86[ASN][1000 genomes]
rs72625624	0.85[ASN][1000 genomes]
rs72625625	0.91[ASN][1000 genomes]
rs72625626	0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs72625627	0.83[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs72625628	0.94[ASN][1000 genomes]
rs72625629	0.98[ASN][1000 genomes]
rs8018091	1.00[CHB][hapmap];0.81[JPT][hapmap]
rs8020611	1.00[CHB][hapmap];0.85[JPT][hapmap]
rs8022441	0.90[JPT][hapmap]
rs915061	0.83[AFR][1000 genomes];0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv902015	chr14:63261862-63356253	Enhancers Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv983834	chr14:63272169-63277791	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:63255600-63274400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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