Variant report

Variant	rs17100325
Chromosome Location	chr14:63214258-63214259
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs12588779	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12589213	1.00[EUR][1000 genomes]
rs12590351	0.80[CHB][hapmap];0.90[JPT][hapmap]
rs12590357	1.00[CHB][hapmap];0.85[JPT][hapmap];0.82[AFR][1000 genomes]
rs17100282	0.90[JPT][hapmap];1.00[EUR][1000 genomes]
rs17100387	1.00[CHB][hapmap];0.85[JPT][hapmap]
rs171459	1.00[YRI][hapmap]
rs1844508	1.00[CHB][hapmap];0.85[JPT][hapmap]
rs35651857	0.88[MEX][hapmap]
rs41490444	1.00[CEU][hapmap];0.93[CHB][hapmap];1.00[GIH][hapmap];0.85[JPT][hapmap];1.00[TSI][hapmap]
rs4533187	1.00[EUR][1000 genomes]
rs59427889	0.90[EUR][1000 genomes]
rs66531558	1.00[EUR][1000 genomes]
rs67434559	0.97[EUR][1000 genomes]
rs67701746	1.00[EUR][1000 genomes]
rs7147349	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs72625622	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72625624	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs72625625	0.87[ASN][1000 genomes]
rs72625626	0.82[AFR][1000 genomes]
rs72625627	0.91[AFR][1000 genomes];0.83[ASN][1000 genomes]
rs72625628	0.81[ASN][1000 genomes]
rs8018091	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs8020611	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8022441	0.80[CHB][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs915061	0.91[AFR][1000 genomes];0.85[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:63207400-63216400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr14:63211600-63218000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
3	chr14:63212800-63221600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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