Variant report

Variant	rs1844508
Chromosome Location	chr14:63274731-63274732
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs12588779	1.00[CHB][hapmap];0.90[JPT][hapmap];0.87[ASN][1000 genomes]
rs12590351	0.80[CHB][hapmap];0.85[JPT][hapmap]
rs12590357	1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs17100282	0.85[JPT][hapmap]
rs17100325	1.00[CHB][hapmap];0.85[JPT][hapmap]
rs17100387	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs2355736	0.97[ASN][1000 genomes]
rs41490444	0.93[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.80[YRI][hapmap]
rs7147349	1.00[CHB][hapmap];0.85[JPT][hapmap];0.84[ASN][1000 genomes]
rs72625624	0.83[ASN][1000 genomes]
rs72625625	0.89[ASN][1000 genomes]
rs72625627	0.95[ASN][1000 genomes]
rs72625628	0.92[ASN][1000 genomes]
rs72625629	1.00[ASN][1000 genomes]
rs8018091	1.00[CHB][hapmap];0.85[JPT][hapmap]
rs8020611	1.00[CHB][hapmap];0.85[JPT][hapmap]
rs8022441	0.80[CHB][hapmap];0.90[JPT][hapmap]
rs915061	0.93[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv902015	chr14:63261862-63356253	Enhancers Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv983834	chr14:63272169-63277791	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	inside rSNPs	diseases
3	esv3353160	chr14:63273142-63277728	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:63274400-63275000	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr14:63274600-63275000	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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