Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs12588779	0.80[CHB][hapmap];0.89[JPT][hapmap];0.89[EUR][1000 genomes]
rs12589213	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12590351	1.00[CHB][hapmap];0.95[JPT][hapmap]
rs12590357	0.80[CHB][hapmap];0.90[JPT][hapmap]
rs17100282	1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs17100325	0.80[CHB][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs17100387	0.90[JPT][hapmap]
rs1844508	0.80[CHB][hapmap];0.90[JPT][hapmap]
rs35651857	0.88[MEX][hapmap]
rs41490444	1.00[GIH][hapmap];0.90[JPT][hapmap];1.00[TSI][hapmap]
rs4533187	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs59427889	0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs66531558	1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs67434559	0.97[EUR][1000 genomes]
rs67701746	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7147349	0.80[CHB][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs72625622	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs72625624	0.92[EUR][1000 genomes]
rs8018091	0.80[CHB][hapmap];0.95[JPT][hapmap]
rs8020611	0.80[CHB][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.97[EUR][1000 genomes];0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv527675	chr14:63168547-63211280	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv974287	chr14:63210415-63211979	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:63202800-63212000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr14:63207400-63216400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr14:63209000-63211600	Enhancers	iPS-18 Cell Line	embryonic stem cell
4	chr14:63210400-63211400	Enhancers	HUES48 Cell Line	embryonic stem cell
5	chr14:63210400-63211400	Enhancers	HUES64 Cell Line	embryonic stem cell
6	chr14:63210600-63211800	Weak transcription	H9 Cell Line	embryonic stem cell

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