The 2.0 version of rSNPBase

Variant report

Variant rs236334
Chromosome Location chr1:94061405-94061406
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94025600-94073800 Weak transcription Fetal Brain Female brain
2 chr1:94042200-94063200 Weak transcription Brain Germinal Matrix brain
3 chr1:94048600-94064200 Weak transcription Brain Inferior Temporal Lobe brain
4 chr1:94053600-94063000 Genic enhancers Muscle Satellite Cultured Cells --
5 chr1:94054600-94062000 Weak transcription Brain Substantia Nigra brain
6 chr1:94056000-94066000 Weak transcription Ovary ovary
7 chr1:94057400-94068000 Genic enhancers HSMM muscle
8 chr1:94057400-94069200 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr1:94057400-94071000 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr1:94057600-94106400 Weak transcription Primary B cells from cord blood blood
11 chr1:94057800-94061800 Enhancers Placenta Placenta
12 chr1:94058000-94062000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr1:94058000-94062800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr1:94058000-94062800 Genic enhancers NHEK skin
15 chr1:94058000-94066600 Enhancers Adipose Nuclei Adipose
16 chr1:94058000-94066600 Enhancers Fetal Muscle Leg muscle
17 chr1:94058200-94064600 Weak transcription HUVEC blood vessel
18 chr1:94058200-94065000 Enhancers Colon Smooth Muscle Colon
19 chr1:94058400-94062800 Enhancers A549 lung
20 chr1:94058400-94063200 Enhancers Breast Myoepithelial Primary Cells Breast
21 chr1:94058400-94065200 Enhancers NHDF-Ad bronchial
22 chr1:94058400-94068800 Weak transcription Small Intestine intestine
23 chr1:94058600-94064600 Enhancers NHLF lung
24 chr1:94058600-94068000 Enhancers Skeletal Muscle Female skeletal muscle
25 chr1:94058800-94063600 Weak transcription Spleen Spleen
26 chr1:94058800-94065600 Weak transcription Fetal Adrenal Gland Adrenal Gland
27 chr1:94059000-94063400 Enhancers Skeletal Muscle Male skeletal muscle
28 chr1:94059400-94062000 Enhancers HUES48 Cell Line embryonic stem cell
29 chr1:94059400-94062200 Enhancers Fetal Kidney kidney
30 chr1:94059400-94062400 Enhancers ES-I3 Cell Line embryonic stem cell
31 chr1:94059400-94062800 Enhancers HUES6 Cell Line embryonic stem cell
32 chr1:94059400-94064800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
33 chr1:94059600-94061800 Genic enhancers Liver Liver
34 chr1:94059600-94062600 Enhancers Osteobl bone
35 chr1:94059600-94066000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr1:94059600-94066800 Enhancers Brain Anterior Caudate brain
37 chr1:94059800-94061800 Transcr. at gene 5' and 3' HepG2 liver
38 chr1:94059800-94062800 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr1:94059800-94064200 Enhancers Brain Hippocampus Middle brain
40 chr1:94060000-94063000 Weak transcription Fetal Stomach stomach
41 chr1:94060200-94061600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
42 chr1:94060200-94061600 Strong transcription Fetal Intestine Small intestine
43 chr1:94060200-94062000 Weak transcription Fetal Thymus thymus
44 chr1:94060200-94062400 Enhancers iPS-20b Cell Line embryonic stem cell
45 chr1:94060200-94062400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
46 chr1:94060200-94062400 Weak transcription Esophagus oesophagus
47 chr1:94060200-94063200 Weak transcription Fetal Lung lung
48 chr1:94060200-94063400 Weak transcription Placenta Amnion Placenta Amnion
49 chr1:94060200-94063600 Weak transcription Pancreas Pancrea
50 chr1:94060200-94063800 Weak transcription HUES64 Cell Line embryonic stem cell

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Last update: Aug 31, 2015