Variant report

Variant	rs2368291
Chromosome Location	chr2:182956863-182956864
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs1107901	0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1107902	0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11899083	0.80[EUR][1000 genomes]
rs13395225	0.82[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13398100	0.81[EUR][1000 genomes]
rs13420407	0.82[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1400003	0.87[EUR][1000 genomes]
rs1400004	0.88[EUR][1000 genomes]
rs1432524	0.81[EUR][1000 genomes]
rs1515891	0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1962724	0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2163697	0.80[EUR][1000 genomes]
rs2368292	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6748404	0.94[AFR][1000 genomes];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7558558	0.87[EUR][1000 genomes]
rs7600720	0.87[EUR][1000 genomes]
rs768742	0.81[EUR][1000 genomes]
rs9288078	0.94[AFR][1000 genomes];0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs953267	0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv875477	chr2:182938377-183086478	Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Genic enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:182954200-182968200	Weak transcription	Psoas Muscle	Psoas

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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