The 2.0 version of rSNPBase

Variant report

Variant rs2370081
Chromosome Location chr1:193040872-193040873
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:193029400-193046400 Weak transcription Gastric stomach
2 chr1:193029400-193051800 Weak transcription Esophagus oesophagus
3 chr1:193029400-193051800 Weak transcription Pancreas Pancrea
4 chr1:193029800-193046400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr1:193030000-193046800 Weak transcription ES-WA7 Cell Line embryonic stem cell
6 chr1:193030200-193046000 Weak transcription Thymus Thymus
7 chr1:193030400-193045000 Weak transcription Placenta Placenta
8 chr1:193030400-193045200 Weak transcription Primary monocytes fromperipheralblood blood
9 chr1:193030400-193046400 Weak transcription Fetal Stomach stomach
10 chr1:193030400-193046400 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr1:193030400-193051600 Weak transcription Colonic Mucosa Colon
12 chr1:193030600-193046200 Weak transcription Fetal Kidney kidney
13 chr1:193030600-193048200 Weak transcription Fetal Intestine Small intestine
14 chr1:193030800-193042000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr1:193030800-193042000 Weak transcription Fetal Lung lung
16 chr1:193030800-193042400 Weak transcription Hela-S3 cervix
17 chr1:193030800-193045400 Weak transcription NHDF-Ad bronchial
18 chr1:193030800-193045600 Weak transcription NHLF lung
19 chr1:193030800-193045800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr1:193030800-193046000 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr1:193030800-193046400 Weak transcription Rectal Smooth Muscle rectum
22 chr1:193030800-193046400 Weak transcription HSMMtube muscle
23 chr1:193030800-193050400 Weak transcription Brain Substantia Nigra brain
24 chr1:193031200-193046800 Weak transcription Fetal Brain Male brain
25 chr1:193031400-193046000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
26 chr1:193032000-193046400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr1:193033200-193042000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr1:193033200-193046000 Weak transcription Small Intestine intestine
29 chr1:193033200-193046400 Weak transcription Right Ventricle heart
30 chr1:193033200-193067600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
31 chr1:193033400-193046400 Weak transcription H9 Cell Line embryonic stem cell
32 chr1:193033400-193046600 Weak transcription HMEC breast
33 chr1:193033600-193045800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
34 chr1:193033600-193046600 Weak transcription Brain Hippocampus Middle brain
35 chr1:193035800-193046400 Weak transcription Aorta Aorta
36 chr1:193037800-193051600 Weak transcription Ovary ovary
37 chr1:193038600-193042400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
38 chr1:193038600-193046400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
39 chr1:193038800-193041200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr1:193038800-193044800 Weak transcription iPS-20b Cell Line embryonic stem cell
41 chr1:193038800-193046000 Weak transcription Muscle Satellite Cultured Cells --
42 chr1:193038800-193046400 Weak transcription Breast Myoepithelial Primary Cells Breast
43 chr1:193038800-193046600 Weak transcription NHEK skin
44 chr1:193039000-193046400 Weak transcription Brain Angular Gyrus brain
45 chr1:193039000-193046400 Weak transcription HUVEC blood vessel
46 chr1:193039200-193041400 Weak transcription Fetal Thymus thymus
47 chr1:193039200-193042000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr1:193039200-193042200 Weak transcription Dnd41 blood
49 chr1:193039200-193045200 Weak transcription Primary B cells from cord blood blood
50 chr1:193039200-193045600 Weak transcription Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015