The 2.0 version of rSNPBase

Variant report

Variant rs12735445
Chromosome Location chr1:192996347-192996348
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:192963800-193012400 Weak transcription NHEK skin
2 chr1:192963800-193019600 Weak transcription Ovary ovary
3 chr1:192968000-193009400 Weak transcription HUES6 Cell Line embryonic stem cell
4 chr1:192968000-193012400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
5 chr1:192968000-193019400 Weak transcription Skeletal Muscle Male skeletal muscle
6 chr1:192977600-193005200 Weak transcription A549 lung
7 chr1:192979200-193025600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr1:192981400-193026200 Weak transcription Primary T killer naive cells fromperipheralblood blood
9 chr1:192982400-192996400 Weak transcription Fetal Intestine Small intestine
10 chr1:192982600-193002400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr1:192983000-193017800 Weak transcription HSMMtube muscle
12 chr1:192983200-192996400 Weak transcription Fetal Stomach stomach
13 chr1:192983200-193000000 Weak transcription Right Ventricle heart
14 chr1:192983200-193012800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr1:192983200-193018000 Weak transcription Pancreas Pancrea
16 chr1:192983200-193023600 Weak transcription Psoas Muscle Psoas
17 chr1:192983200-193027800 Weak transcription Aorta Aorta
18 chr1:192984000-192997600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr1:192984000-192998200 Weak transcription NHDF-Ad bronchial
20 chr1:192984200-193026600 Weak transcription NHLF lung
21 chr1:192984400-193026400 Weak transcription HUVEC blood vessel
22 chr1:192984800-193025800 Weak transcription Primary T helper naive cells from peripheral blood blood
23 chr1:192986200-193012000 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr1:192987000-193009200 Weak transcription iPS-18 Cell Line embryonic stem cell
25 chr1:192987400-193026200 Weak transcription Fetal Kidney kidney
26 chr1:192988600-192997800 Weak transcription Rectal Smooth Muscle rectum
27 chr1:192988600-193008400 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr1:192988800-192997200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
29 chr1:192988800-192997400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr1:192988800-193006000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
31 chr1:192988800-193012600 Weak transcription Colon Smooth Muscle Colon
32 chr1:192989000-192998800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr1:192989200-192996600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
34 chr1:192989400-192997400 Strong transcription Monocytes-CD14+_RO01746 blood
35 chr1:192989800-192998400 Weak transcription Brain Cingulate Gyrus brain
36 chr1:192989800-193012600 Weak transcription Spleen Spleen
37 chr1:192990000-192997200 Strong transcription Fetal Thymus thymus
38 chr1:192990400-192998600 Strong transcription Primary monocytes fromperipheralblood blood
39 chr1:192990400-192998800 Strong transcription Primary T helper cells fromperipheralblood blood
40 chr1:192990400-192998800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr1:192990600-192999600 Strong transcription Dnd41 blood
42 chr1:192990800-193012800 Weak transcription Fetal Brain Female brain
43 chr1:192991200-192996600 Strong transcription Primary T helper cells PMA-I stimulated --
44 chr1:192991200-192997200 Strong transcription Primary hematopoietic stem cells short term culture blood
45 chr1:192991200-193014400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr1:192991400-193012600 Weak transcription Stomach Smooth Muscle stomach
47 chr1:192991400-193018000 Weak transcription H1 Cell Line embryonic stem cell
48 chr1:192991600-192997000 Weak transcription HMEC breast
49 chr1:192991600-193009600 Weak transcription ES-I3 Cell Line embryonic stem cell
50 chr1:192991600-193018000 Weak transcription H9 Cell Line embryonic stem cell

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Last update: Aug 31, 2015