Variant report

Variant rs10801177
Chromosome Location chr1:193093397-193093398
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:193090200-193093600 Active TSS NHDF-Ad bronchial
2 chr1:193090200-193094000 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
3 chr1:193090400-193093400 Active TSS HUES48 Cell Line embryonic stem cell
4 chr1:193090400-193093800 Active TSS Right Atrium heart
5 chr1:193090400-193093800 Active TSS NHLF lung
6 chr1:193090400-193094000 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr1:193090800-193093600 Active TSS HMEC breast
8 chr1:193091800-193093400 Flanking Active TSS Primary T cells from cord blood blood
9 chr1:193091800-193093400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
10 chr1:193091800-193093600 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
11 chr1:193091800-193093800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr1:193091800-193094400 Weak transcription Spleen Spleen
13 chr1:193092200-193093400 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
14 chr1:193092200-193093600 Flanking Active TSS Dnd41 blood
15 chr1:193092200-193093800 Enhancers Fetal Brain Male brain
16 chr1:193092200-193094200 Enhancers Brain Substantia Nigra brain
17 chr1:193092200-193094400 Weak transcription Sigmoid Colon Sigmoid Colon
18 chr1:193092400-193093400 Enhancers Primary B cells from cord blood blood
19 chr1:193092400-193093600 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
20 chr1:193092400-193093600 Enhancers Rectal Mucosa Donor 31 rectum
21 chr1:193092400-193093800 Enhancers Primary T killer naive cells fromperipheralblood blood
22 chr1:193092400-193093800 Enhancers Liver Liver
23 chr1:193092400-193093800 Enhancers Stomach Mucosa stomach
24 chr1:193092400-193093800 Flanking Active TSS NHEK skin
25 chr1:193092400-193094200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
26 chr1:193092400-193094200 Enhancers Primary T killer memory cells from peripheral blood blood
27 chr1:193092400-193094400 Enhancers Primary T helper cells fromperipheralblood blood
28 chr1:193092400-193094600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
29 chr1:193092600-193093400 Flanking Active TSS Hela-S3 cervix
30 chr1:193092600-193093600 Enhancers Primary hematopoietic stem cells blood
31 chr1:193092600-193093600 Flanking Active TSS Osteobl bone
32 chr1:193092600-193093800 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr1:193092600-193093800 Enhancers Brain Inferior Temporal Lobe brain
34 chr1:193092600-193093800 Flanking Active TSS Duodenum Smooth Muscle Duodenum
35 chr1:193092600-193093800 Enhancers Fetal Heart heart
36 chr1:193092600-193093800 Enhancers Skeletal Muscle Male skeletal muscle
37 chr1:193092600-193094000 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr1:193092600-193094000 Enhancers Brain Cingulate Gyrus brain
39 chr1:193092600-193094200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr1:193092600-193094200 Enhancers Primary T helper naive cells fromperipheralblood blood
41 chr1:193092600-193094200 Enhancers Brain Hippocampus Middle brain
42 chr1:193092600-193094400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
43 chr1:193092600-193094400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
44 chr1:193092600-193094400 Weak transcription H9 Cell Line embryonic stem cell
45 chr1:193092600-193094400 Weak transcription Left Ventricle heart
46 chr1:193092600-193094400 Weak transcription Lung lung
47 chr1:193092600-193094400 Weak transcription Pancreas Pancrea
48 chr1:193092600-193096000 Weak transcription Colonic Mucosa Colon
49 chr1:193092600-193099400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
50 chr1:193092600-193099400 Weak transcription Placenta Amnion Placenta Amnion

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