Variant report

Variant	rs10754049
Chromosome Location	chr1:193120667-193120668
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 131 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:130)

rs_ID	r²[population]
rs10399607	0.89[AFR][1000 genomes];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10399929	0.90[AFR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10494674	1.00[CEU][hapmap];0.91[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10732293	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10733078	1.00[CHB][hapmap];0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs10737620	0.91[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10737621	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs10737622	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10754044	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10754046	0.95[ASN][1000 genomes]
rs10754047	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10754048	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10754052	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.97[LWK][hapmap];1.00[MEX][hapmap];0.94[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10754053	0.85[AFR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10801173	0.95[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs10801174	0.85[ASN][1000 genomes]
rs10801175	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10801177	1.00[CHB][hapmap];0.95[CHD][hapmap];0.84[GIH][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs10801178	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10801179	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.86[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10801180	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10801182	0.99[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10801183	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10801184	1.00[CHB][hapmap];0.98[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs10801187	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs10801188	0.86[ASN][1000 genomes]
rs10801189	1.00[CHB][hapmap];0.98[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs10921308	1.00[CEU][hapmap];0.95[CHB][hapmap];0.93[CHD][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.94[TSI][hapmap];0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10921310	0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10921312	0.81[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.93[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.84[LWK][hapmap];1.00[MEX][hapmap];0.87[MKK][hapmap];1.00[TSI][hapmap];0.91[YRI][hapmap];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10921313	0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10921317	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10921318	1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs10921319	0.97[ASN][1000 genomes]
rs10921323	1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs10921325	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];0.90[JPT][hapmap];0.90[LWK][hapmap];0.95[MEX][hapmap];0.91[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.85[AFR][1000 genomes];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10921326	1.00[CHB][hapmap];0.98[CHD][hapmap];0.85[GIH][hapmap];0.95[JPT][hapmap];0.86[ASN][1000 genomes]
rs10921330	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[YRI][hapmap]
rs11577299	1.00[CHB][hapmap];0.98[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs12086884	0.95[CHB][hapmap];1.00[JPT][hapmap]
rs12090626	1.00[CHB][hapmap];1.00[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.81[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12126529	1.00[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];1.00[TSI][hapmap];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12137318	0.97[ASN][1000 genomes]
rs12141392	0.86[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.87[YRI][hapmap]
rs12145057	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs12410213	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1325197	1.00[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];0.97[LWK][hapmap];1.00[MEX][hapmap];0.94[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1408830	1.00[CHB][hapmap];0.98[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs1536097	0.86[AFR][1000 genomes];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1536098	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1536099	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1539724	0.90[JPT][hapmap];0.99[ASN][1000 genomes]
rs1616234	0.84[AFR][1000 genomes]
rs1632444	0.84[AFR][1000 genomes]
rs1749424	0.81[AFR][1000 genomes]
rs1890660	0.91[CEU][hapmap];0.95[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.81[TSI][hapmap]
rs2078083	0.89[AFR][1000 genomes]
rs2181408	0.91[CEU][hapmap];1.00[CHB][hapmap];0.90[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.81[MKK][hapmap];0.85[TSI][hapmap];0.91[YRI][hapmap];0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2182106	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.86[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2186016	1.00[CHB][hapmap];0.95[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs2254646	0.84[AFR][1000 genomes]
rs2275444	0.91[CEU][hapmap];0.95[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.81[TSI][hapmap];0.82[ASN][1000 genomes]
rs2370028	0.97[ASN][1000 genomes]
rs2370029	0.87[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.90[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2370079	0.90[CEU][hapmap];0.95[CHB][hapmap];0.93[CHD][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];0.81[TSI][hapmap];0.80[ASN][1000 genomes]
rs2486842	0.85[AFR][1000 genomes]
rs3738244	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[YRI][hapmap]
rs3806351	1.00[CHB][hapmap];0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs3818865	0.86[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.87[YRI][hapmap]
rs3820417	0.81[ASW][hapmap];0.86[CEU][hapmap];0.95[CHB][hapmap];0.86[CHD][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.81[TSI][hapmap];0.87[YRI][hapmap]
rs3945872	0.95[CHB][hapmap];0.88[CHD][hapmap];1.00[JPT][hapmap]
rs4379660	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.97[LWK][hapmap];1.00[MEX][hapmap];0.96[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes]
rs4450000	1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs4466634	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4657744	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs4657745	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4657842	0.86[CEU][hapmap];0.95[CHB][hapmap];0.93[CHD][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.81[TSI][hapmap]
rs4657843	1.00[CEU][hapmap];0.95[CHB][hapmap];0.93[CHD][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.94[TSI][hapmap];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4657845	0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4657846	0.93[ASN][1000 genomes]
rs4657847	1.00[CHB][hapmap];0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs4657848	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.97[LWK][hapmap];1.00[MEX][hapmap];0.86[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4658079	0.95[CHB][hapmap];1.00[JPT][hapmap]
rs503265	0.81[AFR][1000 genomes]
rs524701	0.84[AFR][1000 genomes]
rs543788	0.84[AFR][1000 genomes]
rs569656	0.95[CEU][hapmap];0.95[CHB][hapmap];0.87[JPT][hapmap];1.00[YRI][hapmap]
rs571029	0.84[AFR][1000 genomes]
rs6428151	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6428152	0.91[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.85[TSI][hapmap];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6428153	0.86[AFR][1000 genomes];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6428154	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6428155	0.86[ASN][1000 genomes]
rs6428156	1.00[CHB][hapmap];0.98[CHD][hapmap];0.84[GIH][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs6428157	1.00[CHB][hapmap];0.98[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs6428159	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];0.94[MKK][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap]
rs6661522	0.81[CHB][hapmap]
rs6663162	0.86[ASN][1000 genomes]
rs6663431	0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6665069	0.82[ASW][hapmap];0.91[CEU][hapmap];1.00[CHB][hapmap];0.93[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.81[MKK][hapmap];0.85[TSI][hapmap];0.87[YRI][hapmap];0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6665666	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];0.94[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6671237	0.82[ASW][hapmap];0.91[CEU][hapmap];1.00[CHB][hapmap];0.93[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.81[MKK][hapmap];0.85[TSI][hapmap];0.87[YRI][hapmap];0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6673271	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.96[LWK][hapmap];1.00[MEX][hapmap];0.90[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap]
rs6675833	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.86[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.85[AFR][1000 genomes];0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6676322	0.95[CHB][hapmap];1.00[JPT][hapmap]
rs6676416	0.85[CEU][hapmap];0.95[CHB][hapmap];0.88[CHD][hapmap];0.91[JPT][hapmap];0.89[MEX][hapmap];0.87[YRI][hapmap]
rs6676878	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.97[LWK][hapmap];1.00[MEX][hapmap];0.96[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6680224	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6692342	0.81[ASW][hapmap];0.86[CEU][hapmap];0.95[CHB][hapmap];0.93[CHD][hapmap];0.80[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.81[TSI][hapmap];0.87[YRI][hapmap]
rs6693734	0.90[CEU][hapmap]
rs6697079	0.95[CHB][hapmap];0.97[CHD][hapmap];0.84[GIH][hapmap];0.95[JPT][hapmap]
rs6703727	0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs693519	0.86[CEU][hapmap];0.95[CHB][hapmap];0.87[JPT][hapmap];1.00[YRI][hapmap]
rs7514072	0.95[CHB][hapmap];0.95[CHD][hapmap];0.82[GIH][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs7515024	1.00[CHB][hapmap];1.00[CHD][hapmap];0.89[GIH][hapmap];1.00[JPT][hapmap];0.87[YRI][hapmap]
rs7518792	0.91[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.85[TSI][hapmap];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7519242	1.00[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];1.00[TSI][hapmap];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7542466	0.81[CEU][hapmap];0.90[CHB][hapmap];0.88[CHD][hapmap];0.91[JPT][hapmap];0.82[ASN][1000 genomes]
rs7545223	0.90[AFR][1000 genomes];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7546869	0.86[ASN][1000 genomes]
rs7547615	1.00[CHB][hapmap];0.88[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs7553247	0.80[ASN][1000 genomes]
rs7554925	0.86[ASN][1000 genomes]
rs817136	0.82[AFR][1000 genomes]
rs817140	0.85[CEU][hapmap];0.95[CHB][hapmap];0.86[JPT][hapmap];1.00[YRI][hapmap]
rs843844	0.94[ASW][hapmap];0.86[CEU][hapmap];0.95[CHB][hapmap];0.92[GIH][hapmap];0.87[JPT][hapmap];0.87[LWK][hapmap];1.00[MEX][hapmap];0.80[MKK][hapmap];0.85[TSI][hapmap];0.95[YRI][hapmap]
rs912070	0.91[CEU][hapmap];1.00[CHB][hapmap];0.93[CHD][hapmap];0.89[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.85[TSI][hapmap];0.91[YRI][hapmap];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs912071	0.91[CEU][hapmap];1.00[CHB][hapmap];0.90[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.83[TSI][hapmap];0.91[YRI][hapmap];0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9427838	0.81[ASW][hapmap];1.00[CEU][hapmap];0.95[CHB][hapmap];0.93[CHD][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.94[TSI][hapmap];0.87[YRI][hapmap];0.84[EUR][1000 genomes]
rs9783104	0.81[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.84[LWK][hapmap];1.00[MEX][hapmap];0.87[MKK][hapmap];1.00[TSI][hapmap];0.91[YRI][hapmap];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532618	chr1:192537006-193149179	Weak transcription Strong transcription Active TSS Flanking Active TSS Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	70 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:124 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:193092600-193141600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr1:193093800-193125000	Weak transcription	Stomach Mucosa	stomach
3	chr1:193093800-193126400	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr1:193094800-193155000	Weak transcription	Aorta	Aorta
5	chr1:193095000-193124400	Strong transcription	Dnd41	blood
6	chr1:193097400-193126800	Strong transcription	Monocytes-CD14+_RO01746	blood
7	chr1:193101000-193140000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
8	chr1:193101400-193130000	Weak transcription	Colonic Mucosa	Colon
9	chr1:193101600-193124800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
10	chr1:193104200-193123400	Strong transcription	Duodenum Mucosa	Duodenum
11	chr1:193104200-193126200	Strong transcription	Primary monocytes fromperipheralblood	blood
12	chr1:193104200-193135000	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
13	chr1:193104400-193124000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
14	chr1:193106000-193140800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr1:193107000-193121600	Strong transcription	Primary hematopoietic stem cells short term culture	blood
16	chr1:193109600-193126200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
17	chr1:193109600-193128200	Weak transcription	Placenta Amnion	Placenta Amnion
18	chr1:193109800-193125800	Weak transcription	Gastric	stomach
19	chr1:193109800-193126200	Strong transcription	HUES64 Cell Line	embryonic stem cell
20	chr1:193110000-193123200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
21	chr1:193110000-193139600	Weak transcription	Esophagus	oesophagus
22	chr1:193110000-193149400	Weak transcription	Right Ventricle	heart
23	chr1:193110000-193155200	Weak transcription	Skeletal Muscle Male	skeletal muscle
24	chr1:193110200-193125800	Strong transcription	HUES48 Cell Line	embryonic stem cell
25	chr1:193111600-193137600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
26	chr1:193111800-193123800	Strong transcription	Primary T helper cells fromperipheralblood	blood
27	chr1:193112000-193122600	Weak transcription	HMEC	breast
28	chr1:193112000-193124000	Strong transcription	Primary T helper cells PMA-I stimulated	--
29	chr1:193112000-193125200	Weak transcription	Pancreatic Islets	Pancreatic Islet
30	chr1:193112200-193126600	Weak transcription	Brain Angular Gyrus	brain
31	chr1:193112600-193122000	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
32	chr1:193113400-193124200	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
33	chr1:193113400-193125800	Strong transcription	Primary B cells from cord blood	blood
34	chr1:193113600-193123200	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
35	chr1:193113600-193124000	Strong transcription	Primary T cells fromperipheralblood	blood
36	chr1:193113600-193124200	Strong transcription	Primary B cells from peripheral blood	blood
37	chr1:193113600-193124200	Strong transcription	GM12878-XiMat	blood
38	chr1:193113600-193124800	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
39	chr1:193113600-193126800	Strong transcription	K562	blood
40	chr1:193113800-193123400	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
41	chr1:193113800-193123600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
42	chr1:193113800-193123800	Strong transcription	iPS-20b Cell Line	embryonic stem cell
43	chr1:193113800-193123800	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
44	chr1:193114000-193124400	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
45	chr1:193114000-193124400	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
46	chr1:193114000-193126800	Strong transcription	Fetal Thymus	thymus
47	chr1:193114200-193121000	Strong transcription	H1 Cell Line	embryonic stem cell
48	chr1:193114200-193123200	Strong transcription	Placenta	Placenta
49	chr1:193114200-193123400	Strong transcription	Primary T helper 17 cells PMA-I stimulated	--
50	chr1:193114200-193123600	Strong transcription	Breast Myoepithelial Primary Cells	Breast

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