The 2.0 version of rSNPBase

Variant report

Variant rs6428154
Chromosome Location chr1:193152599-193152600
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:193094800-193155000 Weak transcription Aorta Aorta
2 chr1:193110000-193155200 Weak transcription Skeletal Muscle Male skeletal muscle
3 chr1:193121000-193155200 Weak transcription Pancreas Pancrea
4 chr1:193123200-193153600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr1:193123400-193155200 Weak transcription Thymus Thymus
6 chr1:193123800-193153200 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr1:193124000-193153600 Weak transcription Primary T cells fromperipheralblood blood
8 chr1:193124000-193154200 Weak transcription iPS-18 Cell Line embryonic stem cell
9 chr1:193126200-193152600 Weak transcription HepG2 liver
10 chr1:193126200-193154400 Weak transcription NHEK skin
11 chr1:193126200-193155200 Weak transcription HUES64 Cell Line embryonic stem cell
12 chr1:193126200-193155200 Weak transcription Gastric stomach
13 chr1:193126800-193155000 Weak transcription Fetal Thymus thymus
14 chr1:193127600-193154400 Weak transcription Hela-S3 cervix
15 chr1:193128600-193154800 Weak transcription NH-A brain
16 chr1:193129400-193153600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr1:193130400-193154800 Weak transcription Primary T killer naive cells fromperipheralblood blood
18 chr1:193131800-193158600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr1:193133200-193153600 Weak transcription Fetal Intestine Small intestine
20 chr1:193133200-193154800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
21 chr1:193133200-193154800 Weak transcription Fetal Muscle Trunk muscle
22 chr1:193134000-193154400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr1:193135600-193155000 Weak transcription Small Intestine intestine
24 chr1:193135600-193155200 Weak transcription Primary T helper naive cells from peripheral blood blood
25 chr1:193136000-193152600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
26 chr1:193136000-193152600 Weak transcription Fetal Stomach stomach
27 chr1:193137600-193154400 Weak transcription Placenta Amnion Placenta Amnion
28 chr1:193137600-193154800 Weak transcription HMEC breast
29 chr1:193140200-193154800 Weak transcription Breast Myoepithelial Primary Cells Breast
30 chr1:193140400-193152600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr1:193140400-193155200 Weak transcription Adipose Nuclei Adipose
32 chr1:193140400-193159800 Weak transcription Dnd41 blood
33 chr1:193140600-193154800 Weak transcription HUVEC blood vessel
34 chr1:193140600-193155200 Weak transcription Primary hematopoietic stem cells short term culture blood
35 chr1:193140800-193154000 Weak transcription Fetal Adrenal Gland Adrenal Gland
36 chr1:193140800-193161400 Weak transcription Monocytes-CD14+_RO01746 blood
37 chr1:193142000-193154400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr1:193142200-193152600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr1:193142200-193155400 Weak transcription Primary B cells from peripheral blood blood
40 chr1:193142400-193154600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr1:193142800-193155200 Weak transcription GM12878-XiMat blood
42 chr1:193144200-193160400 Weak transcription Primary monocytes fromperipheralblood blood
43 chr1:193144600-193155400 Weak transcription Primary B cells from cord blood blood
44 chr1:193147800-193155000 Weak transcription Primary T cells from cord blood blood
45 chr1:193148400-193161200 Weak transcription Primary hematopoietic stem cells blood
46 chr1:193148600-193152600 Weak transcription Rectal Mucosa Donor 31 rectum
47 chr1:193149400-193152800 Active TSS Right Atrium heart
48 chr1:193149600-193156600 Active TSS Brain Dorsolateral Prefrontal Cortex brain
49 chr1:193149800-193156600 Active TSS Brain Inferior Temporal Lobe brain
50 chr1:193150000-193155000 Weak transcription K562 blood

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Last update: Aug 31, 2015