The 2.0 version of rSNPBase

Variant report

Variant rs1536097
Chromosome Location chr1:193144789-193144790
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:193094800-193155000 Weak transcription Aorta Aorta
2 chr1:193110000-193149400 Weak transcription Right Ventricle heart
3 chr1:193110000-193155200 Weak transcription Skeletal Muscle Male skeletal muscle
4 chr1:193116600-193149400 Weak transcription Brain Germinal Matrix brain
5 chr1:193118000-193147800 Weak transcription Rectal Smooth Muscle rectum
6 chr1:193120400-193150400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
7 chr1:193121000-193155200 Weak transcription Pancreas Pancrea
8 chr1:193123200-193147400 Weak transcription Fetal Brain Female brain
9 chr1:193123200-193151600 Weak transcription Fetal Kidney kidney
10 chr1:193123200-193153600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr1:193123400-193147600 Weak transcription Fetal Brain Male brain
12 chr1:193123400-193155200 Weak transcription Thymus Thymus
13 chr1:193123600-193149600 Weak transcription Brain Hippocampus Middle brain
14 chr1:193123800-193147800 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr1:193123800-193150400 Weak transcription Muscle Satellite Cultured Cells --
16 chr1:193123800-193153200 Weak transcription Rectal Mucosa Donor 29 rectum
17 chr1:193124000-193152000 Weak transcription Liver Liver
18 chr1:193124000-193153600 Weak transcription Primary T cells fromperipheralblood blood
19 chr1:193124000-193154200 Weak transcription iPS-18 Cell Line embryonic stem cell
20 chr1:193124200-193150400 Weak transcription NHDF-Ad bronchial
21 chr1:193125200-193152200 Weak transcription A549 lung
22 chr1:193126200-193147800 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr1:193126200-193152600 Weak transcription HepG2 liver
24 chr1:193126200-193154400 Weak transcription NHEK skin
25 chr1:193126200-193155200 Weak transcription HUES64 Cell Line embryonic stem cell
26 chr1:193126200-193155200 Weak transcription Gastric stomach
27 chr1:193126400-193147800 Weak transcription Colon Smooth Muscle Colon
28 chr1:193126800-193155000 Weak transcription Fetal Thymus thymus
29 chr1:193127600-193154400 Weak transcription Hela-S3 cervix
30 chr1:193128600-193154800 Weak transcription NH-A brain
31 chr1:193128800-193150200 Weak transcription Osteobl bone
32 chr1:193129400-193153600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr1:193130400-193147600 Weak transcription Primary T helper naive cells fromperipheralblood blood
34 chr1:193130400-193147600 Weak transcription Primary T killer memory cells from peripheral blood blood
35 chr1:193130400-193154800 Weak transcription Primary T killer naive cells fromperipheralblood blood
36 chr1:193130600-193147000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
37 chr1:193131800-193158600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr1:193133200-193153600 Weak transcription Fetal Intestine Small intestine
39 chr1:193133200-193154800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
40 chr1:193133200-193154800 Weak transcription Fetal Muscle Trunk muscle
41 chr1:193134000-193154400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr1:193135600-193155000 Weak transcription Small Intestine intestine
43 chr1:193135600-193155200 Weak transcription Primary T helper naive cells from peripheral blood blood
44 chr1:193136000-193149400 Weak transcription Left Ventricle heart
45 chr1:193136000-193152600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
46 chr1:193136000-193152600 Weak transcription Fetal Stomach stomach
47 chr1:193137600-193150400 Weak transcription Stomach Smooth Muscle stomach
48 chr1:193137600-193154400 Weak transcription Placenta Amnion Placenta Amnion
49 chr1:193137600-193154800 Weak transcription HMEC breast
50 chr1:193137800-193145200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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Last update: Aug 31, 2015