The 2.0 version of rSNPBase

Variant report

Variant rs1578243
Chromosome Location chr1:193237041-193237042
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:193155800-193243400 Weak transcription Pancreas Pancrea
2 chr1:193187000-193245200 Weak transcription Skeletal Muscle Male skeletal muscle
3 chr1:193216400-193238800 Weak transcription Hela-S3 cervix
4 chr1:193217000-193244600 Weak transcription H1 Cell Line embryonic stem cell
5 chr1:193217200-193240200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr1:193218000-193239400 Weak transcription Esophagus oesophagus
7 chr1:193218400-193239200 Weak transcription Osteobl bone
8 chr1:193218400-193239400 Weak transcription Left Ventricle heart
9 chr1:193218600-193237600 Weak transcription Rectal Smooth Muscle rectum
10 chr1:193218600-193258200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr1:193218800-193238800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
12 chr1:193220400-193237200 Weak transcription iPS-20b Cell Line embryonic stem cell
13 chr1:193220600-193239400 Weak transcription HUES64 Cell Line embryonic stem cell
14 chr1:193222400-193253800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr1:193228400-193239200 Weak transcription Aorta Aorta
16 chr1:193228400-193239400 Weak transcription HUES6 Cell Line embryonic stem cell
17 chr1:193228400-193243600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
18 chr1:193228400-193244600 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr1:193229000-193254800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
20 chr1:193229600-193239200 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr1:193229600-193240800 Weak transcription Gastric stomach
22 chr1:193231600-193251200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr1:193232000-193237200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr1:193232000-193249400 Weak transcription Fetal Heart heart
25 chr1:193232200-193238800 Weak transcription Primary B cells from cord blood blood
26 chr1:193232200-193239400 Weak transcription HSMMtube muscle
27 chr1:193232200-193239600 Weak transcription NHLF lung
28 chr1:193232600-193244600 Weak transcription Primary T cells from cord blood blood
29 chr1:193234000-193237400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
30 chr1:193234000-193239400 Weak transcription NH-A brain
31 chr1:193234000-193239800 Weak transcription Muscle Satellite Cultured Cells --
32 chr1:193235200-193240200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr1:193235400-193237600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr1:193235400-193239400 Weak transcription Primary hematopoietic stem cells blood
35 chr1:193235400-193240200 Weak transcription GM12878-XiMat blood
36 chr1:193235400-193242200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr1:193235400-193243000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr1:193235400-193252000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr1:193235400-193252200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr1:193235600-193237400 Weak transcription HSMM muscle

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Last update: Aug 31, 2015