The 2.0 version of rSNPBase

Variant report

Variant rs6663162
Chromosome Location chr1:193157929-193157930
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:193131800-193158600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr1:193140400-193159800 Weak transcription Dnd41 blood
3 chr1:193140800-193161400 Weak transcription Monocytes-CD14+_RO01746 blood
4 chr1:193144200-193160400 Weak transcription Primary monocytes fromperipheralblood blood
5 chr1:193148400-193161200 Weak transcription Primary hematopoietic stem cells blood
6 chr1:193153600-193158000 Active TSS Right Atrium heart
7 chr1:193155400-193161400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr1:193155600-193158200 Weak transcription Placenta Amnion Placenta Amnion
9 chr1:193155600-193160000 Weak transcription Gastric stomach
10 chr1:193155600-193160200 Weak transcription K562 blood
11 chr1:193155600-193178400 Weak transcription HUVEC blood vessel
12 chr1:193155800-193158000 Weak transcription Left Ventricle heart
13 chr1:193155800-193159400 Weak transcription GM12878-XiMat blood
14 chr1:193155800-193159800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
15 chr1:193155800-193160000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr1:193155800-193160200 Enhancers Fetal Intestine Small intestine
17 chr1:193155800-193160400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr1:193155800-193160600 Weak transcription Fetal Thymus thymus
19 chr1:193155800-193161200 Weak transcription Breast Myoepithelial Primary Cells Breast
20 chr1:193155800-193161200 Weak transcription Primary B cells from peripheral blood blood
21 chr1:193155800-193161400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
22 chr1:193155800-193161400 Weak transcription Fetal Muscle Trunk muscle
23 chr1:193155800-193161400 Weak transcription Thymus Thymus
24 chr1:193155800-193161600 Weak transcription Primary B cells from cord blood blood
25 chr1:193155800-193161600 Weak transcription Skeletal Muscle Female skeletal muscle
26 chr1:193155800-193175000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr1:193155800-193183000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
28 chr1:193155800-193243400 Weak transcription Pancreas Pancrea
29 chr1:193156000-193158800 Weak transcription iPS-15b Cell Line embryonic stem cell
30 chr1:193156000-193159000 Enhancers Primary T killer memory cells from peripheral blood blood
31 chr1:193156000-193159800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr1:193156000-193160200 Weak transcription HUES64 Cell Line embryonic stem cell
33 chr1:193156000-193160200 Enhancers Fetal Intestine Large intestine
34 chr1:193156000-193161800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr1:193156000-193161800 Weak transcription Psoas Muscle Psoas
36 chr1:193156000-193167400 Weak transcription Ovary ovary
37 chr1:193156000-193175400 Weak transcription HMEC breast
38 chr1:193156200-193158000 Weak transcription Brain Cingulate Gyrus brain
39 chr1:193156200-193158400 Weak transcription Skeletal Muscle Male skeletal muscle
40 chr1:193156200-193158400 Weak transcription HepG2 liver
41 chr1:193156200-193158800 Weak transcription NHDF-Ad bronchial
42 chr1:193156200-193159800 Weak transcription Adipose Nuclei Adipose
43 chr1:193156200-193160000 Enhancers Primary T helper cells PMA-I stimulated --
44 chr1:193156200-193160400 Enhancers Primary T helper 17 cells PMA-I stimulated --
45 chr1:193156200-193161400 Weak transcription Fetal Muscle Leg muscle
46 chr1:193156200-193174600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
47 chr1:193156200-193175400 Weak transcription NHEK skin
48 chr1:193156200-193216800 Weak transcription Aorta Aorta
49 chr1:193156400-193158000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr1:193156400-193158000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015