Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:76546670..76552147-chr11:76556220..76560576,6	K562	blood:
2	chr11:76548072..76552147-chr11:76556220..76559677,3	K562	blood:

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10899290	1.00[ASN][1000 genomes]
rs10899291	1.00[ASN][1000 genomes]
rs1149576	0.81[ASN][1000 genomes]
rs1149578	0.96[ASN][1000 genomes]
rs1149579	0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1149580	0.86[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1224950	0.87[ASN][1000 genomes]
rs1225130	0.97[ASN][1000 genomes]
rs1225138	0.97[ASN][1000 genomes]
rs1225145	0.87[AFR][1000 genomes];0.87[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1225146	0.87[AFR][1000 genomes];0.87[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1225148	0.87[AFR][1000 genomes];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12270437	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12785471	0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12793753	0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4944123	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72941813	1.00[ASN][1000 genomes]
rs7930010	0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7931306	0.99[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7938899	0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs894066	0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:76549600-76561000	Weak transcription	Right Atrium	heart
2	chr11:76549600-76570800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr11:76549800-76572000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr11:76550600-76566400	Weak transcription	Lung	lung
5	chr11:76553400-76560400	Weak transcription	K562	blood
6	chr11:76556400-76561600	Weak transcription	Liver	Liver
7	chr11:76557200-76559200	Enhancers	Primary monocytes fromperipheralblood	blood
8	chr11:76557400-76559200	Enhancers	HepG2	liver
9	chr11:76558200-76558800	Enhancers	Fetal Heart	heart
10	chr11:76558200-76558800	Bivalent Enhancer	HSMMtube	muscle
11	chr11:76558200-76559000	Enhancers	Monocytes-CD14+_RO01746	blood
12	chr11:76558400-76558800	Enhancers	Adipose Nuclei	Adipose
13	chr11:76558400-76558800	Bivalent Enhancer	Duodenum Smooth Muscle	Duodenum
14	chr11:76558400-76559000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
15	chr11:76558400-76559000	Enhancers	Ovary	ovary
16	chr11:76558400-76559200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
17	chr11:76558400-76559200	Enhancers	Placenta	Placenta
18	chr11:76558600-76558800	Enhancers	Breast Myoepithelial Primary Cells	Breast
19	chr11:76558600-76558800	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
20	chr11:76558600-76558800	Enhancers	Rectal Mucosa Donor 31	rectum
21	chr11:76558600-76559000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

Quick Search: