Variant report

Variant rs2378906
Chromosome Location chr17:59883131-59883132
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:59816800-59887800 Weak transcription H9 Cell Line embryonic stem cell
2 chr17:59825800-59898400 Weak transcription Thymus Thymus
3 chr17:59847600-59883400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
4 chr17:59848800-59911200 Weak transcription HUVEC blood vessel
5 chr17:59849400-59887200 Weak transcription Primary neutrophils fromperipheralblood blood
6 chr17:59849800-59887200 Weak transcription Cortex derived primary cultured neurospheres brain
7 chr17:59850000-59887000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
8 chr17:59850000-59887000 Weak transcription Monocytes-CD14+_RO01746 blood
9 chr17:59851200-59902600 Weak transcription Fetal Stomach stomach
10 chr17:59852600-59898000 Weak transcription Fetal Intestine Small intestine
11 chr17:59857000-59888600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr17:59860200-59883200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr17:59862000-59887200 Weak transcription Fetal Kidney kidney
14 chr17:59863600-59925000 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr17:59866000-59883200 Weak transcription ES-WA7 Cell Line embryonic stem cell
16 chr17:59866400-59883400 Weak transcription Fetal Lung lung
17 chr17:59868400-59888600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr17:59869200-59898200 Weak transcription Fetal Muscle Leg muscle
19 chr17:59869600-59887400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr17:59870400-59933400 Weak transcription Fetal Intestine Large intestine
21 chr17:59873200-59905000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr17:59873800-59883400 Weak transcription ES-I3 Cell Line embryonic stem cell
23 chr17:59874000-59883400 Weak transcription K562 blood
24 chr17:59874000-59887000 Weak transcription Primary hematopoietic stem cells blood
25 chr17:59874400-59910600 Weak transcription Hela-S3 cervix
26 chr17:59874600-59887200 Weak transcription Primary monocytes fromperipheralblood blood
27 chr17:59875400-59883400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr17:59875400-59886600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr17:59876600-59885600 Weak transcription iPS-18 Cell Line embryonic stem cell
30 chr17:59878000-59883400 Weak transcription HUES6 Cell Line embryonic stem cell
31 chr17:59879000-59888400 Weak transcription H1 Cell Line embryonic stem cell
32 chr17:59879400-59898000 Weak transcription Fetal Thymus thymus
33 chr17:59879600-59883400 Weak transcription HUES48 Cell Line embryonic stem cell
34 chr17:59879600-59893400 Weak transcription HepG2 liver
35 chr17:59880600-59885000 Weak transcription HUES64 Cell Line embryonic stem cell
36 chr17:59880800-59883400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
37 chr17:59880800-59887200 Weak transcription Primary hematopoietic stem cells short term culture blood
38 chr17:59881000-59898400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr17:59882200-59883600 Enhancers HSMM muscle
40 chr17:59882200-59884000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr17:59882200-59884800 Enhancers NHDF-Ad bronchial
42 chr17:59882400-59883600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr17:59882400-59883600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr17:59882400-59883600 Enhancers Muscle Satellite Cultured Cells --
45 chr17:59882600-59883400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr17:59882600-59883600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
47 chr17:59882600-59883600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr17:59882600-59883600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
49 chr17:59882600-59883600 Enhancers Placenta Amnion Placenta Amnion
50 chr17:59882600-59883800 Enhancers A549 lung

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